From 2a1e3d528265c3d366dab9ad4b0c4d3d65e1c4ed Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Mon, 13 Apr 2020 12:13:50 +0000
Subject: [PATCH] Storing previously debugged version
---
src/cell.c | 23 ++++++++++++++---------
1 files changed, 14 insertions(+), 9 deletions(-)
diff --git a/src/cell.c b/src/cell.c
index 97f2fe7..3df15ea 100644
--- a/src/cell.c
+++ b/src/cell.c
@@ -1,3 +1,4 @@
+/* vim: set ts=4 sts=4 sw=4 noet : */
#include<stdlib.h>
#include "general.h"
#include "vertex.h"
@@ -5,7 +6,7 @@
ts_cell_list *init_cell_list(ts_uint ncmax1, ts_uint ncmax2, ts_uint ncmax3, ts_double stepsize){
ts_uint i;
ts_uint nocells=ncmax1*ncmax2*ncmax3;
- ts_cell_list *clist=(ts_cell_list *)malloc(sizeof(ts_cell_list));
+ ts_cell_list *clist=(ts_cell_list *)calloc(1,sizeof(ts_cell_list));
if(clist==NULL) fatal("Error while allocating memory for cell list!",100);
clist->ncmax[0]=ncmax1;
@@ -14,8 +15,8 @@
clist->cellno=nocells;
clist->dcell=1.0/(1.0 + stepsize);
clist->shift=(ts_double) clist->ncmax[0]/2;
-
- clist->cell=(ts_cell **)malloc(nocells*sizeof(ts_cell *));
+ clist->max_occupancy=16; /* hard coded max occupancy? */
+ clist->cell=(ts_cell **)calloc(nocells,sizeof(ts_cell *));
if(clist->cell==NULL) fatal("Error while allocating memory for cell list! ncmax too large?",101);
for(i=0;i<nocells;i++){
@@ -44,7 +45,6 @@
}
-//TODO: not debugged at all!
inline ts_uint vertex_self_avoidance(ts_vesicle *vesicle, ts_vertex *vtx){
ts_uint cellidx;
ts_uint ncx, ncy,ncz;
@@ -68,7 +68,6 @@
}
-//TODO: looks ok, but debug anyway in the future
inline ts_bool cell_add_vertex(ts_cell *cell, ts_vertex *vtx){
ts_uint i;
for(i=0;i<cell->nvertex;i++){
@@ -124,7 +123,7 @@
return TS_SUCCESS;
}
-// TODO: compiles ok, but it is completely untested and undebugged. It was debugged before rewrite, but this was long time ago.
+
ts_bool cell_occupation_number_and_internal_proximity(ts_cell_list *clist, ts_uint cellidx, ts_vertex *vtx){
ts_uint ncx,ncy,ncz,remainder,cell_occupation;
ts_uint i,j,k,l,neigh_cidx;
@@ -143,6 +142,7 @@
cell_occupation=clist->cell[neigh_cidx]->nvertex;
// fprintf(stderr, "cell_occupation=%i\n",cell_occupation);
if(cell_occupation>clist->max_occupancy){
+ ts_fprintf(stderr,"max occupancy= %d, cell occupation= %d", clist->max_occupancy, cell_occupation);
fatal("Neighbouring cell occupation more than set max_occupancy value.",2000);
}
// Now we check whether we didn't come close to some other vertices in the same
@@ -151,11 +151,16 @@
for(l=0;l<cell_occupation;l++){
//carefull with this checks!
- if(clist->cell[neigh_cidx]->vertex[l]->idx!=vtx->idx){
+ if(clist->cell[neigh_cidx]->vertex[l]!=vtx){
// fprintf(stderr,"calling dist on vertex %i\n",l);
dist=vtx_distance_sq(clist->cell[neigh_cidx]->vertex[l],vtx);
- // fprintf(stderr,"dist was %f\n",dist);
- if(dist<=1.0) return TS_FAIL;
+
+// if(vtx->idx==1)
+// fprintf(stderr,"VTX(0) ima bliznji vertex z indeksom, %d, tipa %d \n", clist->cell[neigh_cidx]->vertex[l]->idx, clist->cell[neigh_cidx]->vertex[l]->id);
+// if(vtx->idx==0 && clist->cell[neigh_cidx]->vertex[l]->idx==0)
+// fprintf(stderr,"*** dist was %f\n",dist);
+
+ if(dist<=1.0 || (dist<=clist->dmin_interspecies && (clist->cell[neigh_cidx]->vertex[l]->id != vtx->id))) return TS_FAIL;
}
}
}
--
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