From 267cf14b1ced6fce480e4292131a987a1802e28a Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Sun, 23 Sep 2018 08:32:24 +0000
Subject: [PATCH] Confinement planes, not debugged

---
 src/tape |   22 ++++++++++++++++++++--
 1 files changed, 20 insertions(+), 2 deletions(-)

diff --git a/src/tape b/src/tape
index 93e42d7..8e4cc9a 100644
--- a/src/tape
+++ b/src/tape
@@ -25,7 +25,7 @@
 
 ####### Polymer (brush) definitions ###########
 # npoly is a number of polymers attached to npoly distinct vertices on vesicle
-npoly=400
+npoly=0
 # nmono is a number of monomers in each polymer
 nmono=10
 # Spring constant between monomers of the polymer
@@ -56,7 +56,7 @@
 ####### Program Control ############
 #how many MC sweeps between subsequent records of states to disk
 #200000
-mcsweeps=200
+mcsweeps=2000
 #how many initial mcsweeps*inititer MC sweeps before recording to disk?
 #2
 inititer=1
@@ -84,3 +84,21 @@
 #max number of processes in distributed (voluntary) environment
 distributed_processes=50
 #cuda options???
+
+
+#number of vertices with spontaneous curvature (integer)
+number_of_vertices_with_c0=100
+#c0/2 is spontaneous curvature. c0 is used as (c1+c1-c0)^2 in energy term (float)
+c0=0.5
+#energy of attraction of vertices with spontaneous curvature (float, positive value for attraction)
+w=10.0
+#direct force on vesicles with spontaneous curvature (float)
+F=2.0
+
+
+#plane confinement
+plane_confinement_switch=1
+#final plane distance (float in lmin)
+plane_d=10.0
+#plane to vesicle repulsion force while closing
+plane_F=10

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