From 267cf14b1ced6fce480e4292131a987a1802e28a Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Sun, 23 Sep 2018 08:32:24 +0000
Subject: [PATCH] Confinement planes, not debugged

---
 src/tape |   13 ++++++++++---
 1 files changed, 10 insertions(+), 3 deletions(-)

diff --git a/src/tape b/src/tape
index f2edf02..8e4cc9a 100644
--- a/src/tape
+++ b/src/tape
@@ -25,7 +25,7 @@
 
 ####### Polymer (brush) definitions ###########
 # npoly is a number of polymers attached to npoly distinct vertices on vesicle
-npoly=400
+npoly=0
 # nmono is a number of monomers in each polymer
 nmono=10
 # Spring constant between monomers of the polymer
@@ -86,12 +86,19 @@
 #cuda options???
 
 
-#NirGov branch only!
 #number of vertices with spontaneous curvature (integer)
 number_of_vertices_with_c0=100
-#spontaneous curvature (float)
+#c0/2 is spontaneous curvature. c0 is used as (c1+c1-c0)^2 in energy term (float)
 c0=0.5
 #energy of attraction of vertices with spontaneous curvature (float, positive value for attraction)
 w=10.0
 #direct force on vesicles with spontaneous curvature (float)
 F=2.0
+
+
+#plane confinement
+plane_confinement_switch=1
+#final plane distance (float in lmin)
+plane_d=10.0
+#plane to vesicle repulsion force while closing
+plane_F=10

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