From 262607715dced9c01b742ac2127af65750a3be3b Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Wed, 27 Jun 2012 14:53:51 +0000
Subject: [PATCH] Added program that calculates square spherical harmonics averages and stores them into file

---
 src/sh.c |   25 ++++++++++++++++++++++++-
 1 files changed, 24 insertions(+), 1 deletions(-)

diff --git a/src/sh.c b/src/sh.c
index ea050b9..31df74f 100644
--- a/src/sh.c
+++ b/src/sh.c
@@ -9,7 +9,7 @@
     ts_uint j,i;
     ts_spharm *sph=(ts_spharm *)malloc(sizeof(ts_spharm));
 
-    
+    sph->N=0;
     /* lets initialize Ylm for each vertex. */
     sph->Ylmi=(ts_double ***)calloc(l,sizeof(ts_double **));
     for(i=0;i<l;i++){
@@ -25,6 +25,11 @@
         sph->ulm[j]=(ts_double *)calloc(2*j+1,sizeof(ts_double));
     }
 
+    /* lets initialize sum of Ulm2 */
+    sph->sumUlm2=(ts_double **)calloc(l,sizeof(ts_double *));
+    for(j=0;j<l;j++){
+        sph->sumUlm2[j]=(ts_double *)calloc(2*j+1,sizeof(ts_double));
+    }
 
     /* lets initialize co */
 //NOTE: C is has zero based indexing. Code is imported from fortran and to comply with original indexes we actually generate one index more. Also second dimension is 2*j+2 instead of 2*j+2. elements starting with 0 are useles and should be ignored!
@@ -46,6 +51,7 @@
     int i,j;
     for(i=0;i<sph->l;i++){
         if(sph->ulm[i]!=NULL) free(sph->ulm[i]);
+        if(sph->sumUlm2[i]!=NULL) free(sph->sumUlm2[i]);
         if(sph->co[i]!=NULL) free(sph->co[i]);
     }
         if(sph->co[sph->l]!=NULL) free(sph->co[sph->l]);
@@ -354,3 +360,20 @@
 
     return TS_SUCCESS;
 }
+
+
+
+
+
+ts_bool storeUlm2(ts_vesicle *vesicle){
+
+ts_spharm *sph=vesicle->sphHarmonics;
+ts_int i,j;
+for(i=0;i<sph->l;i++){
+    for(j=0;j<2*i+1;j++){
+    sph->sumUlm2[i][j]+=sph->ulm[i][j]* sph->ulm[i][j];
+    }
+}
+	sph->N++;
+return TS_SUCCESS;
+}

--
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