From 23d807748be58e5178c04304d9cc788bf122eb12 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@fe.uni-lj.si>
Date: Tue, 11 Feb 2014 15:34:18 +0000
Subject: [PATCH] Make changes in memory allocation. Memory reservation is done, but pointers are not linked into corresponding structure. A lot to be done still. However, check how pointers can be recalculated at any time when the block is copied in memory.
---
src/general.h | 39 ++++++++++++++++++++++++++++++++++-----
1 files changed, 34 insertions(+), 5 deletions(-)
diff --git a/src/general.h b/src/general.h
index b775bd2..afd238b 100644
--- a/src/general.h
+++ b/src/general.h
@@ -169,6 +169,7 @@
ts_vertex *vtx2;
ts_double bond_length;
ts_double bond_length_dual;
+ ts_bool tainted;
};
typedef struct ts_bond ts_bond;
@@ -187,6 +188,7 @@
ts_double ynorm;
ts_double znorm;
ts_double area; // firstly needed for sh.c
+ ts_double volume; // firstly needed for sh.c
};
typedef struct ts_triangle ts_triangle;
@@ -215,10 +217,11 @@
typedef struct {
ts_uint l;
- ts_uint i;
- ts_double ***Ylmi;
ts_double **ulm;
- ts_uint **co;
+ ts_double **sumUlm2;
+ ts_uint N;
+ ts_double **co;
+ ts_double ***Ylmi;
} ts_spharm;
@@ -237,14 +240,40 @@
ts_spharm *sphHarmonics;
} ts_vesicle;
-
-
+typedef struct {
+ ts_uint vertex_no;
+ ts_uint ncmax[3];
+ ts_vesicle *vesicle;
+ ts_vertex_list *vlist;
+ ts_bond_list *blist;
+ ts_triangle_list *tlist;
+ ts_cell_list *clist;
+ ts_vertex **vtx_ptr;
+ ts_vertex *vtx;
+ ts_vertex *vtx_neighbours;
+ ts_vertex **vtx_neighbours_ptr;
+ ts_bond **vtx_neighbond;
+ ts_triangle **tristar;
+ ts_triangle **tria_ptr;
+ ts_triangle *tria;
+ ts_triangle **trianeigh;
+ ts_bond **bond_ptr;
+ ts_bond *bond;
+ ts_cell **cell_ptr;
+ ts_cell *cell;
+ ts_vertex **cell_ocupancy;
+ /* ts_spharm *sphHarmonics; */
+} ts_memory;
/* GLOBAL VARIABLES */
int quiet;
+/* ERROR CODES */
+#define TS_ERR_MEM_ALLOC 1
+
+
/* FUNCTIONS */
/** Non-fatal error function handler:
--
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