From 23b0edbc039c47c7b39288c8e16a72c968cfe3b3 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Tue, 10 Jul 2012 12:45:50 +0000
Subject: [PATCH] Merged with bondflip debug branch
---
src/main.c | 25 ++++++++++++++++++-------
1 files changed, 18 insertions(+), 7 deletions(-)
diff --git a/src/main.c b/src/main.c
index 94e64ec..d84b611 100644
--- a/src/main.c
+++ b/src/main.c
@@ -30,14 +30,15 @@
retval=vtx_add_cneighbour(blist,vlist->vtx[1],vlist->vtx[0]);
if(retval==TS_FAIL) printf("1. already a member or vertex is null!\n");
-retval=vtx_add_cneighbour(blist,vlist->vtx[0],vlist->vtx[1]);
+retval=vtx_add_neighbour(vlist->vtx[0],vlist->vtx[1]);
if(retval==TS_FAIL) printf("2. already a member or vertex is null!\n");
-
-retval=vtx_remove_neighbour(vlist->vtx[0],vlist->vtx[1]);
+fprintf(stderr,"Was here");
+retval=vtx_remove_neighbour(vlist->vtx[1],vlist->vtx[0]);
vtx_add_neighbour(vlist->vtx[0],vlist->vtx[1]);
+fprintf(stderr,"Was here too!\n");
-vlist->vtx[0]->data->x=1.0;
-vlist->vtx[0]->data->x=1.1;
+vlist->vtx[0]->x=1.0;
+vlist->vtx[0]->x=1.1;
vlist1=vertex_list_copy(vlist);
bond_add(blist, vlist->vtx[1],vlist->vtx[0]);
triangle_add(tlist,vlist->vtx[1],vlist->vtx[2],vlist->vtx[3]);
@@ -47,7 +48,7 @@
printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->nvertex);
cell_add_vertex(clist->cell[0], vlist->vtx[0]);
printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->nvertex);
-printf("Cell idx=1 has vertex[0] has x coordinate=%e\n",clist->cell[0]->vertex[0]->data->x);
+printf("Cell idx=1 has vertex[0] has x coordinate=%e\n",clist->cell[0]->vertex[0]->x);
cell_list_cell_occupation_clear(clist);
printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->nvertex);
cell_add_vertex(clist->cell[0], vlist->vtx[0]);
@@ -61,12 +62,22 @@
vtx_list_free(vlist1);
printf("Tests complete.\n");
vesicle=initial_distribution_dipyramid(17,60,60,60,0.15);
+//parsetape(vesicle,&i);
+
+//these four must come from parsetype!
+vesicle->dmax=1.67*1.67;
+vesicle->stepsize=0.15;
+vesicle->clist->max_occupancy=8;
+vesicle->bending_rigidity=25.0;
+fprintf(stderr,"xk=%f",vesicle->bending_rigidity);
centermass(vesicle);
cell_occupation(vesicle);
for(i=0;i<100;i++){
single_timestep(vesicle);
-write_vertex_xml_file(vesicle,i);
+if(i%100==0){
+write_vertex_xml_file(vesicle,i/100);
+}
}
write_master_xml_file("test.pvd");
write_dout_fcompat_file(vesicle,"dout");
--
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