From 200815edf1548d444aa3b5db908a1628adeb2a05 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Tue, 05 Nov 2013 17:53:51 +0000
Subject: [PATCH] Vertex tainting done

---
 src/timestep.c |   20 ++++++++++++++++----
 1 files changed, 16 insertions(+), 4 deletions(-)

diff --git a/src/timestep.c b/src/timestep.c
index 4c9fa67..1ac1eb4 100644
--- a/src/timestep.c
+++ b/src/timestep.c
@@ -7,6 +7,7 @@
 #include "vertexmove.h"
 #include "bondflip.h"
 #include "frame.h"
+#include "vertex.h"
 #include "io.h"
 ts_bool run_simulation(ts_vesicle *vesicle, ts_uint mcsweeps, ts_uint inititer, ts_uint iterations){
 	ts_uint i, j;
@@ -30,22 +31,33 @@
 ts_bool single_timestep(ts_vesicle *vesicle){
     ts_bool retval;
     ts_double rnvec[3];
-    ts_uint i;
+    ts_uint i, b;
     for(i=0;i<vesicle->vlist->n;i++){
         rnvec[0]=drand48();
         rnvec[1]=drand48();
         rnvec[2]=drand48();
+	vertex_taint(vesicle->vlist->vtx[i],1);
+//		ts_fprintf(stdout, "Vertex %d should be tainted, level=%d.\n", i, vesicle->vlist->vtx[i]->locked);
+	if(vertex_tainted(vesicle->vlist->vtx[i],1,1)){
+		ts_fprintf(stdout, "Vertex %d tainted, level=%d. Waiting....\n", i, vesicle->vlist->vtx[i]->locked);
+		while(vertex_tainted(vesicle->vlist->vtx[i],1,1));
+	}
         retval=single_verticle_timestep(vesicle,vesicle->vlist->vtx[i],rnvec);
+	vertex_untaint(vesicle->vlist->vtx[i],1);
+//		ts_fprintf(stdout, "Vertex %d should be untainted, level=%d.\n", i, vesicle->vlist->vtx[i]->locked);
     }
 
 //	ts_int cnt=0;
-    for(i=0;i<vesicle->blist->n;i++){
-        rnvec[0]=drand48();
+    for(i=0;i<vesicle->vlist->n;i++){
+//why is rnvec needed in bondflip?
+/*        rnvec[0]=drand48();
         rnvec[1]=drand48();
         rnvec[2]=drand48();
+*/ 
+	b=rand() % vesicle->blist->n;
         //find a bond and return a pointer to a bond...
         //call single_bondflip_timestep...
-        retval=single_bondflip_timestep(vesicle,vesicle->blist->bond[i],rnvec);
+        retval=single_bondflip_timestep(vesicle,vesicle->blist->bond[b],rnvec);
 //	if(retval==TS_SUCCESS) cnt++;        
     } 
 //	printf("Bondflip success rate in one sweep: %d/%d=%e\n", cnt,vesicle->blist->n,(double)cnt/(double)vesicle->blist->n);

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