From 1665aaef46e1bf85eb99f709bb596ab4fcc07f59 Mon Sep 17 00:00:00 2001 From: Samo Penic <samo.penic@gmail.com> Date: Fri, 25 Apr 2014 07:52:42 +0000 Subject: [PATCH] Added extra calculation of Kc from 3<=l<=6 --- src/tape | 25 +++++++++++++++++-------- 1 files changed, 17 insertions(+), 8 deletions(-) diff --git a/src/tape b/src/tape index 38871bd..0801375 100644 --- a/src/tape +++ b/src/tape @@ -3,6 +3,8 @@ nshell=17 # dmax is the max. bond length (in units l_min) dmax=1.7 +# dmin_interspecies in the min. dist. between different vertex species (in units l_min) +dmin_interspecies=1.2 # bending rigidity of the membrane (in units kT) xk0=10.0 # max step size (in units l_min) @@ -23,12 +25,16 @@ k_spring=800 ####### Filament (inside the vesicle) definitions ########### -# npoly is a number of polymers attached to npoly distinct vertices on vesicle +# nfil is a number of filaments inside the vesicle nfil=0 -# nmono is a number of monomers in each filament -nfono=10 -# Spring constant between monomers of the filament -k_sfring=800 +# nfono is a number of monomers in each filament +nfono=300 +# Persistence lenght of the filaments (in units l_min) +xi=0 + +####### Nucleus (inside the vesicle) ########### +# Radius of an impenetrable hard sphere inside the vesicle +R_nucleus=0 ####### Cell definitions ############ nxmax=60 @@ -38,13 +44,16 @@ ####### Program Control ############ #how many MC sweeps between subsequent records of states to disk -mcsweeps=5000 +mcsweeps=2500 #how many initial mcsweeps*inititer MC sweeps before recording to disk? -inititer=1 +inititer=0 #how many records do you want on the disk iteration are there in a run? -iterations=1000 +iterations=15000 +###### Spherical harmonics ########### +spherical_harmonics_coefficients=21 + #shut up if we are using cluster!!! quiet=false -- Gitblit v1.9.3