From 142a67fe82b830e5c7816914afa62445959c87ca Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@fe.uni-lj.si>
Date: Tue, 05 Nov 2013 14:04:21 +0000
Subject: [PATCH] changes in bondflip call. No need to bondflip all the bonds, but only as many bonds as there are vertices. Also, rnvec seems to be not needed for bondflip, so it is commented out
---
src/main.c | 47 ++++++++++++++++++++++++++++++++---------------
1 files changed, 32 insertions(+), 15 deletions(-)
diff --git a/src/main.c b/src/main.c
index 77a84ab..7e12c1c 100644
--- a/src/main.c
+++ b/src/main.c
@@ -5,8 +5,11 @@
#include "bond.h"
#include "triangle.h"
#include "cell.h"
-//#include "io.h"
-//#include "initial_timestep.h"
+#include "vesicle.h"
+#include "io.h"
+#include "initial_distribution.h"
+#include "frame.h"
+#include "timestep.h"
/** Entrance function to the program
* @param argv is a number of parameters used in program call (including the program name
@@ -15,36 +18,40 @@
*/
int main(int argv, char *argc[]){
+ts_uint inititer,mcsweeps, iterations;
+ts_vesicle *vesicle;
+/* THIS SHOULD GO INTO UNIT TEST
ts_bool retval;
-ts_vertex_list *vlist=init_vertex_list(5);
+ ts_vertex_list *vlist=init_vertex_list(5);
+ts_vertex_list *vlist1;
ts_bond_list *blist=init_bond_list();
ts_triangle_list *tlist=init_triangle_list();
ts_cell_list *clist=init_cell_list(3,3,3,0.3);
-
retval=vtx_add_cneighbour(blist,vlist->vtx[1],vlist->vtx[0]);
if(retval==TS_FAIL) printf("1. already a member or vertex is null!\n");
-retval=vtx_add_cneighbour(blist,vlist->vtx[0],vlist->vtx[1]);
+retval=vtx_add_neighbour(vlist->vtx[0],vlist->vtx[1]);
if(retval==TS_FAIL) printf("2. already a member or vertex is null!\n");
-
-retval=vtx_remove_neighbour(vlist->vtx[0],vlist->vtx[1]);
+fprintf(stderr,"Was here");
+retval=vtx_remove_neighbour(vlist->vtx[1],vlist->vtx[0]);
vtx_add_neighbour(vlist->vtx[0],vlist->vtx[1]);
+fprintf(stderr,"Was here too!\n");
-vlist->vtx[0]->data->x=1.0;
-vlist->vtx[0]->data->x=1.1;
-
+vlist->vtx[0]->x=1.0;
+vlist->vtx[0]->x=1.1;
+vlist1=vertex_list_copy(vlist);
bond_add(blist, vlist->vtx[1],vlist->vtx[0]);
triangle_add(tlist,vlist->vtx[1],vlist->vtx[2],vlist->vtx[3]);
triangle_add(tlist,vlist->vtx[1],vlist->vtx[2],vlist->vtx[3]);
-printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->data->nvertex);
+printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->nvertex);
cell_add_vertex(clist->cell[0], vlist->vtx[0]);
-printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->data->nvertex);
-printf("Cell idx=1 has vertex[0] has x coordinate=%e\n",clist->cell[0]->data->vertex[0]->data->x);
+printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->nvertex);
+printf("Cell idx=1 has vertex[0] has x coordinate=%e\n",clist->cell[0]->vertex[0]->x);
cell_list_cell_occupation_clear(clist);
-printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->data->nvertex);
+printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->nvertex);
cell_add_vertex(clist->cell[0], vlist->vtx[0]);
@@ -52,6 +59,16 @@
bond_list_free(blist);
vtx_list_free(vlist);
cell_list_free(clist);
-printf("Done.\n");
+
+vtx_list_free(vlist1);
+printf("Tests complete.\n");
+*/
+vesicle=parsetape(&mcsweeps, &inititer, &iterations);
+run_simulation(vesicle, mcsweeps, inititer, iterations);
+
+write_master_xml_file("test.pvd");
+write_dout_fcompat_file(vesicle,"dout");
+vesicle_free(vesicle);
+
return 0; //program finished perfectly ok. We return 0.
}
--
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