From 142a67fe82b830e5c7816914afa62445959c87ca Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@fe.uni-lj.si>
Date: Tue, 05 Nov 2013 14:04:21 +0000
Subject: [PATCH] changes in bondflip call. No need to bondflip all the bonds, but only as many bonds as there are vertices. Also, rnvec seems to be not needed for bondflip, so it is commented out

---
 src/energy.c |    6 ++++--
 1 files changed, 4 insertions(+), 2 deletions(-)

diff --git a/src/energy.c b/src/energy.c
index 4d93753..abbb8e7 100644
--- a/src/energy.c
+++ b/src/energy.c
@@ -28,7 +28,7 @@
     ts_uint jjp,jjm;
     ts_vertex *j,*jp, *jm;
     ts_triangle *jt;
-    ts_double s=0,xh=0,yh=0,zh=0,txn=0,tyn=0,tzn=0;
+    ts_double s=0.0,xh=0.0,yh=0.0,zh=0.0,txn=0.0,tyn=0.0,tzn=0.0;
     ts_double x1,x2,x3,ctp,ctm,tot,xlen;
     ts_double h,ht;
     for(jj=1; jj<=vtx->neigh_no;jj++){
@@ -72,7 +72,9 @@
 #endif
         tot=ctp+ctm;
         tot=0.5*tot;
+
         xlen=vtx_distance_sq(j,vtx);
+/*
 #ifdef  TS_DOUBLE_DOUBLE 
         vtx->bond[jj-1]->bond_length=sqrt(xlen); 
 #endif
@@ -84,7 +86,7 @@
 #endif
 
         vtx->bond[jj-1]->bond_length_dual=tot*vtx->bond[jj-1]->bond_length;
-
+*/
         s+=tot*xlen;
         xh+=tot*(j->x - vtx->x);
         yh+=tot*(j->y - vtx->y);

--
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