From 11e87faa9121f98afef082caff52c0c7979037ec Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Fri, 13 Jun 2014 22:36:59 +0000
Subject: [PATCH] Testing additional triangle data in vtu files.
---
src/timestep.c | 10 ++++++++--
1 files changed, 8 insertions(+), 2 deletions(-)
diff --git a/src/timestep.c b/src/timestep.c
index f2fb478..bdd2e2a 100644
--- a/src/timestep.c
+++ b/src/timestep.c
@@ -14,7 +14,7 @@
#include "vesicle.h"
#include<gsl/gsl_complex.h>
#include<gsl/gsl_complex_math.h>
-
+#include "cross-section.h"
ts_bool run_simulation(ts_vesicle *vesicle, ts_uint mcsweeps, ts_uint inititer, ts_uint iterations, ts_uint start_iteration){
ts_uint i, j,k,l,m;
@@ -24,6 +24,8 @@
FILE *fd1,*fd2=NULL;
// char filename[255];
FILE *fd=fopen("statistics.csv","w");
+
+ ts_coord_list *pts;
if(fd==NULL){
fatal("Cannot open statistics.csv file for writing",1);
}
@@ -68,12 +70,16 @@
if(i>=inititer){
write_vertex_xml_file(vesicle,i-inititer);
write_master_xml_file("test.pvd");
- epochtime=get_epoch();
+ epochtime=get_epoch();
gyration_eigen(vesicle, &l1, &l2, &l3);
vesicle_volume(vesicle); //calculates just volume. Area is not added to ts_vesicle yet!
get_area_volume(vesicle, &area,&volume); //that's why I must recalculate area (and volume for no particular reason).
r0=getR0(vesicle);
if(vesicle->sphHarmonics!=NULL){
+ pts=get_crossection_with_plane(vesicle, 0.0,0.0,1.0,0.0);
+ save_crossection_snapshot(pts,i-inititer);
+ free(pts);
+
preparationSh(vesicle,r0);
//calculateYlmi(vesicle);
calculateUlmComplex(vesicle);
--
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