From 06afc729f9061c1cfa14c78728d61d518324c2f0 Mon Sep 17 00:00:00 2001 From: Samo Penic <samo.penic@gmail.com> Date: Wed, 04 May 2022 05:46:43 +0000 Subject: [PATCH] Moved all global variables to separate file and defined extern keyword where appropriate --- src/bondflip.c | 18 ++++++++++++++---- 1 files changed, 14 insertions(+), 4 deletions(-) diff --git a/src/bondflip.c b/src/bondflip.c index 66c40f7..973a58a 100644 --- a/src/bondflip.c +++ b/src/bondflip.c @@ -14,6 +14,7 @@ #include<stdio.h> #include<string.h> #include "constvol.h" +#include "globals.h" ts_bool single_bondflip_timestep(ts_vesicle *vesicle, ts_bond *bond, ts_double *rn){ /*c Vertex and triangle (lm and lp) indexing for bond flip: @@ -32,7 +33,7 @@ ts_vertex *k=bond->vtx2; ts_uint nei,neip,neim; ts_uint i,j; - ts_double oldenergy, delta_energy, dvol=0.0, darea=0.0; + ts_double oldenergy=0.0, delta_energy=0.0, dvol=0.0, darea=0.0; ts_triangle *lm=NULL,*lp=NULL, *lp1=NULL, *lm2=NULL; ts_vertex *kp,*km; @@ -163,7 +164,7 @@ /* end backup vertex */ /* Save old energy */ - oldenergy=0; + oldenergy=0.0; oldenergy+=k->xk* k->energy; oldenergy+=kp->xk* kp->energy; oldenergy+=km->xk* km->energy; @@ -176,19 +177,24 @@ /* vesicle_volume(vesicle); fprintf(stderr,"Volume in the beginning=%1.16e\n", vesicle->volume); */ - /* fix data structure for flipped bond */ ts_flip_bond(k,it,km,kp, bond,lm, lp, lm2, lp1, vesicle->tape->w); /* Calculating the new energy */ - delta_energy=0; + delta_energy=0.0; delta_energy+=k->xk* k->energy; delta_energy+=kp->xk* kp->energy; delta_energy+=km->xk* km->energy; delta_energy+=it->xk* it->energy; delta_energy+=bond->energy; /* attraction with neighboring vertices, that have spontaneous curvature */ //Neigbours of k, it, km, kp don't change its energy. + if(vesicle->tape->stretchswitch==1){ + oldenergy+=lm->energy+lp->energy; + stretchenergy(vesicle,lm); + stretchenergy(vesicle,lp); + delta_energy+=lm->energy+lp->energy; + } delta_energy-=oldenergy; if(vesicle->pswitch == 1 || vesicle->tape->constvolswitch>0){ @@ -334,6 +340,10 @@ // fprintf(stderr,"Restoration complete!!!\n"); // vesicle_volume(vesicle); // fprintf(stderr,"Volume after fail=%1.16e\n", vesicle->volume); + if(vesicle->tape->stretchswitch==1){ + stretchenergy(vesicle,lm); + stretchenergy(vesicle,lp); + } return TS_FAIL; } -- Gitblit v1.9.3