From 02d65c3c9baa0e76744ce001c55ec699ab3b956f Mon Sep 17 00:00:00 2001
From: Miha Fošnarič <miha.fosnaric@fe.uni-lj.si>
Date: Mon, 11 Jul 2016 13:09:15 +0000
Subject: [PATCH] A fix in energy.c. Normals are summed now.

---
 src/main.c |    5 +++++
 1 files changed, 5 insertions(+), 0 deletions(-)

diff --git a/src/main.c b/src/main.c
index ac92fd5..55c27ba 100644
--- a/src/main.c
+++ b/src/main.c
@@ -30,6 +30,9 @@
 	ts_tape *tape;
 	ts_uint start_iteration=0;
 	force_from_tape=0;
+	/* Area and volume for constant area and constant volume are initialized to be zero */
+	A0=0;
+	V0=0;
 	/* create lock file */
 	createPidFile("ts_trisurf",".lock",0);
 	parse_args(argv,argc); // sets global variable command_line_args (defined in io.h)
@@ -122,7 +125,9 @@
 		}
 		}
 	}
+			//printf("nucleus coords: %.17e %.17e %.17e\n",vesicle->nucleus_center[0], vesicle->nucleus_center[1], vesicle->nucleus_center[2]);
 
+			//write_vertex_xml_file(vesicle,1000);
 	run_simulation(vesicle, tape->mcsweeps, tape->inititer, tape->iterations, start_iteration);
 	write_master_xml_file(command_line_args.output_fullfilename);
 	write_dout_fcompat_file(vesicle,"dout");

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