From d5ddc0a56d9f52f27fb6edcc2fa1caf66fdb9eb0 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Thu, 15 Aug 2019 06:05:39 +0000
Subject: [PATCH] Fixed argtypes in wrapper
---
trisurf/wrapper.py | 57 +++++++++++++++++++++++++++++++++++----------------------
1 files changed, 35 insertions(+), 22 deletions(-)
diff --git a/trisurf/wrapper.py b/trisurf/wrapper.py
index c17cb69..3bdda16 100644
--- a/trisurf/wrapper.py
+++ b/trisurf/wrapper.py
@@ -214,26 +214,26 @@
#function call wrappers
def create_vesicle_from_tape(tape):
"""Using pointer for tape, it creates a vesicle, returning pointer to it."""
- ts.create_vesicle_from_tape.argtype=POINTER(ts_tape)
+ ts.create_vesicle_from_tape.argtypes=POINTER(ts_tape)
ts.create_vesicle_from_tape.restype=POINTER(ts_vesicle)
return ts.create_vesicle_from_tape(tape)
def parsetape(filename='tape'):
"""Loads tape with filename (if not given it defaults to 'tape'). It returns a pointer to structure for tape"""
ts.parsetape.restype=POINTER(ts_tape)
- ts.parsetape.argtype=[c_char_p]
+ ts.parsetape.argtypes=[c_char_p]
return ts.parsetape(filename.encode('ascii'))
def parseDump(filename):
"""Loads a vtu file with 'filename' and creates a vesicle returning pointer to it"""
- ts.parseDump.argtype=[c_char_p]
+ ts.parseDump.argtypes=[c_char_p]
ts.parseDump.restype=POINTER(ts_vesicle)
vesicle=ts.parseDump(filename.encode('ascii'))
return vesicle
def single_timestep(vesicle):
"""Makes a single timestep in simulations. Returns a tuple of vmsrt and bfrt (vertex move success rate and bond flip success rate)"""
- ts.single_timestep.argtype=[POINTER(ts_vesicle),POINTER(c_double),POINTER(c_double)]
+ ts.single_timestep.argtypes=[POINTER(ts_vesicle),POINTER(c_double),POINTER(c_double)]
vmsrt=c_double(0.0)
bfsrt=c_double(0.0)
ts.single_timestep(vesicle,byref(vmsrt),byref(bfsrt))
@@ -241,25 +241,25 @@
def write_vertex_xml_file(vesicle,timestep_no=0):
"""Writes a vesicle into file with filename 'timestep_XXXXXX.vtu', where XXXXXX is a leading zeroed number given with timestep_no parameter (defaults to 0 if not given"""
- ts.write_vertex_xml_file.argtypes=[POINTER(ts_vesicle),c_int]
+ ts.write_vertex_xml_file.argtypess=[POINTER(ts_vesicle),c_int]
ts.write_vertex_xml_file(vesicle,c_int(timestep_no))
def vesicle_free(vesicle):
"""Free memory of the whole vesicle"""
- ts.vesicle_free.argtype=[POINTER(ts_vesicle)]
+ ts.vesicle_free.argtypes=[POINTER(ts_vesicle)]
ts.vesicle_free(vesicle)
def vesicle_volume(vesicle):
- ts.vesicle_volume.argtype=[POINTER(ts_vesicle)]
+ ts.vesicle_volume.argtypes=[POINTER(ts_vesicle)]
ts.vesicle_volume(vesicle)
def vesicle_area(vesicle):
- ts.vesicle_area.argtype=[POINTER(ts_vesicle)]
+ ts.vesicle_area.argtypes=[POINTER(ts_vesicle)]
ts.vesicle_area(vesicle)
def gyration_eigen(vesicle):
- ts.gyration_eigen.argtype=[POINTER(ts_vesicle), POINTER(c_double), POINTER(c_double), POINTER(c_double)]
+ ts.gyration_eigen.argtypes=[POINTER(ts_vesicle), POINTER(c_double), POINTER(c_double), POINTER(c_double)]
l1=c_double(0.0)
l2=c_double(0.0)
l3=c_double(0.0)
@@ -267,7 +267,7 @@
return (l1.value, l2.value, l3.value)
def vesicle_meancurvature(vesicle):
- ts.vesicle_meancurvature.argtype=[POINTER(ts_vesicle)]
+ ts.vesicle_meancurvature.argtypes=[POINTER(ts_vesicle)]
ts.vesicle_meancurvature.restype=c_double
return ts.vesicle_meancurvature(vesicle)
@@ -277,43 +277,56 @@
return ret
def clusterize_vesicle(vesicle, cluster_list):
- ts.clusterize_vesicle.argtype=[POINTER(ts_vesicle), POINTER(ts_cluster_list)]
+ ts.clusterize_vesicle.argtypes=[POINTER(ts_vesicle), POINTER(ts_cluster_list)]
ts.clusterize_vesicle(vesicle, cluster_list)
def cluster_list_free(cluster_list):
"""Free memory of cluster list"""
- ts.cluster_list_free.argtype=[POINTER(ts_cluster_list)]
+ ts.cluster_list_free.argtypes=[POINTER(ts_cluster_list)]
ts.cluster_list_free(cluster_list)
def stretchenergy(vesicle, triangle):
- ts.stretchenergy.argtype=[POINTER(ts_vesicle), POINTER(ts_triangle)]
+ ts.stretchenergy.argtypes=[POINTER(ts_vesicle), POINTER(ts_triangle)]
ts.stretchenergy(vesicle,triangle)
def get_absolute_ulm2(vesicle,l,m):
- ts.get_absolute_ulm2.argtype=[POINTER(ts_vesicle), c_double, c_double]
+ ts.get_absolute_ulm2.argtypes=[POINTER(ts_vesicle), c_double, c_double]
ts.get_absolute_ulm2.restype=c_double
ret=ts.get_absolute_ulm2(vesicle,l,m)
return ret
def getR0(vesicle):
- ts.getR0.argtype=[POINTER(ts_vesicle)]
+ ts.getR0.argtypes=[POINTER(ts_vesicle)]
ts.getR0.restype=c_double
r0=ts.getR0(vesicle)
return r0
def preparationSh(vesicle,r0):
- ts.preparationSh.argtype=[POINTER(ts_vesicle), c_double]
- ts.preparationSh(vesicle,float(r0))
+ ts.preparationSh.argtypes=[POINTER(ts_vesicle), c_double]
+ ts.preparationSh(vesicle,r0)
def calculateUlmComplex(vesicle):
- ts.calculateUlmComplex.argtype=[POINTER(ts_vesicle)]
+ ts.calculateUlmComplex.argtypes=[POINTER(ts_vesicle)]
ts.calculateUlmComplex(vesicle)
-def solve_for_ulm2(vesicle):
- ts.solve_for_ulm2.argtype=[POINTER(ts_vesicle)]
- ts.solve_for_ulm2(vesicle)
+
+def Ulm2Complex2String(vesicle):
+ ts.Ulm2Complex2String.argtypes=[POINTER(ts_vesicle)]
+ ts.Ulm2Complex2String.restype=c_char_p
+ string=ts.Ulm2Complex2String(vesicle)
+ return string
+
+def freeUlm2String(string):
+ ts.freeUlm2String.argtypes=[c_char_p]
+ ts.freeUlm2String(string)
+
+
+#This function seems not to exist!!!
+#def solve_for_ulm2(vesicle):
+# ts.solve_for_ulm2.argtypes=[POINTER(ts_vesicle)]
+# ts.solve_for_ulm2(vesicle)
def mean_curvature_and_energy(vesicle):
- ts.mean_curvature_and_energy.argtype=[POINTER(ts_vesicle)]
+ ts.mean_curvature_and_energy.argtypes=[POINTER(ts_vesicle)]
ts.mean_curvature_and_energy(vesicle)
--
Gitblit v1.9.3