Added a funciton that calculates everything needed for spherical harmonics

Samo Penic

2018-07-02 f977e8fe32b6a1a2ae85662ab35fd7c9f647cc3e

 src/io.c

@@ -826,7 +826,7 @@
   ts_bond_list *blist=vesicle->blist;
   ts_vertex **vtx=vlist->vtx;
    ts_uint i,j;
   ts_double senergy=0.0;
   //ts_double senergy=0.0;
       char filename[10000];
        char just_name[255];
   FILE *fh;
@@ -974,39 +974,27 @@
         }
      }
    fprintf(fh,"</DataArray>\n");

	
   fprintf(fh,"</PointData>\n<CellData>\n");

   if(vesicle->tape->stretchswitch==1){
      fprintf(fh,"<DataArray type=\"Float64\" Name=\"stretching_energy\" format=\"ascii\">");
      for(i=0;i<vlist->n;i++){
         senergy=0.0;
         for(j=0;j<vtx[i]->tristar_no;j++){
            senergy+=vtx[i]->tristar[j]->energy;
         }
         fprintf(fh,"%.17e ",senergy);
      for(i=0;i<blist->n;i++){
         fprintf(fh, "0.0 ");
      }
         //polymeres
         if(poly){
            poly_idx=vlist->n;
            for(i=0;i<vesicle->poly_list->n;i++){
               for(j=0;j<vesicle->poly_list->poly[i]->vlist->n;j++,poly_idx++){
                  fprintf(fh,"%.17e ", 0.0);
               }
            }
         }
         //filaments
         if(fil){
            poly_idx=vlist->n+monono*polyno;
            for(i=0;i<vesicle->filament_list->n;i++){
               for(j=0;j<vesicle->filament_list->poly[i]->vlist->n;j++,poly_idx++){
         //   fprintf(stderr,"was here\n");
                  fprintf(fh,"%.17e ", 0.0);
               }
            }
         }
      for(i=0;i<monono*polyno+filno*(fonono-1);i++){
         fprintf(fh,"0.0 ");
      }
      for(i=0;i<vesicle->tlist->n;i++){
         fprintf(fh,"%.17e ",vesicle->tlist->tria[i]->energy);
      }
       fprintf(fh,"</DataArray>\n");
   }

	
   fprintf(fh,"</PointData>\n<CellData>\n</CellData>\n<Points>\n<DataArray type=\"Float64\" Name=\"Koordinate tock\" NumberOfComponents=\"3\" format=\"ascii\">\n");


   fprintf(fh,"</CellData>\n<Points>\n<DataArray type=\"Float64\" Name=\"Koordinate tock\" NumberOfComponents=\"3\" format=\"ascii\">\n");
   for(i=0;i<vlist->n;i++){
      fprintf(fh,"%.17e %.17e %.17e\n",vtx[i]->x,vtx[i]->y, vtx[i]->z);
   }