| | |
| | | if ((!xmlStrcmp(cur2->name, (const xmlChar *)"Points"))){ |
| | | //fprintf(stderr,"Found point data\n"); |
| | | if(vesicle!=NULL) |
| | | //fprintf(stderr,"Fils: %ld, Nfono: %ld\n", vesicle->tape->nfil, vesicle->tape->nfono); |
| | | parseXMLVertexPosition(vesicle, doc, cur2); |
| | | } |
| | | if ((!xmlStrcmp(cur2->name, (const xmlChar *)"Cells"))){ |
| | |
| | | |
| | | /* TODO: filaments */ |
| | | |
| | | ts_fprintf(stdout,"Restoration completed\n"); |
| | | // ts_fprintf(stdout,"Restoration completed\n"); |
| | | // write_vertex_xml_file(vesicle,999); |
| | | // vesicle_free(vesicle); |
| | | // exit(0); |
| | |
| | | xmlNodePtr child = cur->xmlChildrenNode; |
| | | xmlChar *points; |
| | | char *pts; |
| | | int i, idx, polyidx, monoidx; |
| | | int i, idx, polyidx, monoidx, filidx, fonoidx; |
| | | char *token[3]; |
| | | while (child != NULL) { |
| | | if ((!xmlStrcmp(child->name, (const xmlChar *)"DataArray"))){ |
| | |
| | | vesicle->vlist->vtx[idx]->x=atof(token[0]); |
| | | vesicle->vlist->vtx[idx]->y=atof(token[1]); |
| | | vesicle->vlist->vtx[idx]->z=atof(token[2]); |
| | | } else { |
| | | } else if(vesicle->tape->nmono && vesicle->tape->npoly && idx<vesicle->vlist->n+vesicle->tape->nmono*vesicle->tape->npoly) { |
| | | polyidx=(idx-vesicle->vlist->n)/vesicle->tape->nmono; |
| | | monoidx=(idx-vesicle->vlist->n)%vesicle->tape->nmono; |
| | | vesicle->poly_list->poly[polyidx]->vlist->vtx[monoidx]->x=atof(token[0]); |
| | | vesicle->poly_list->poly[polyidx]->vlist->vtx[monoidx]->y=atof(token[1]); |
| | | vesicle->poly_list->poly[polyidx]->vlist->vtx[monoidx]->z=atof(token[2]); |
| | | } else { |
| | | filidx=(idx-vesicle->vlist->n-vesicle->tape->nmono*vesicle->tape->npoly)/vesicle->tape->nfono; |
| | | fonoidx=(idx-vesicle->vlist->n-vesicle->tape->nmono*vesicle->tape->npoly)%vesicle->tape->nfono; |
| | | //fprintf(stderr,"filidx=%d, fonoidx=%d, coord=%s,%s,%s\n",filidx,fonoidx,token[0],token[1],token[2]); |
| | | vesicle->filament_list->poly[filidx]->vlist->vtx[fonoidx]->x=atof(token[0]); |
| | | vesicle->filament_list->poly[filidx]->vlist->vtx[fonoidx]->y=atof(token[1]); |
| | | vesicle->filament_list->poly[filidx]->vlist->vtx[fonoidx]->z=atof(token[2]); |
| | | } |
| | | for(i=0;i<2;i++) token[i]=strtok(NULL," "); |
| | | token[2]=strtok(NULL,"\n"); |
| | |
| | | } |
| | | child=child->next; |
| | | } |
| | | //fprintf(stderr,"Came here\n"); |
| | | //fprintf(stderr,"Vertices position j=%d\n",idx); |
| | | |
| | | return TS_SUCCESS; |
| | |
| | | } |
| | | else { |
| | | //find grafted vtx |
| | | if((vesicle->tape->nmono-1)==(idx-3*(vesicle->vlist->n-2))%(vesicle->tape->nmono)){ |
| | | if(vesicle->tape->npoly && vesicle->tape->nmono && (vesicle->tape->nmono-1)==(idx-3*(vesicle->vlist->n-2))%(vesicle->tape->nmono) |
| | | && idx<(3*vesicle->vlist->n-2+vesicle->tape->nmono*vesicle->tape->npoly+vesicle->tape->npoly)){ |
| | | polyidx=(idx-3*(vesicle->vlist->n-2))/(vesicle->tape->nmono); |
| | | //fprintf(stderr,"poly=%d, vertex=%d\n",polyidx,atoi(token[0])); |
| | | vesicle->poly_list->poly[polyidx]->grafted_vtx=vesicle->vlist->vtx[atoi(token[0])]; |