Many fixes, before changing bondflip. triangles are still calculated in ts_...

mihaf

2014-03-07 e86357faa6caf28f5032c624fa0cba24e5dc4686

 src/frame.c

@@ -3,7 +3,7 @@
#include "cell.h"
#include "frame.h"
ts_bool centermass(ts_vesicle *vesicle){
    ts_uint i, n=vesicle->vlist->n;
    ts_uint i,j, n=vesicle->vlist->n;
    ts_vertex **vtx=vesicle->vlist->vtx;
    vesicle->cm[0]=0;
    vesicle->cm[1]=0;
@@ -16,27 +16,57 @@
    vesicle->cm[0]/=(ts_float)n;
    vesicle->cm[1]/=(ts_float)n;
    vesicle->cm[2]/=(ts_float)n;

    for(i=0;i<n;i++){
        vtx[i]->x-=vesicle->cm[0];
        vtx[i]->y-=vesicle->cm[1];
        vtx[i]->z-=vesicle->cm[2]; 
    } 

   for(i=0;i<vesicle->poly_list->n;i++){
      for(j=0;j<vesicle->poly_list->poly[i]->vlist->n;j++){
         vesicle->poly_list->poly[i]->vlist->vtx[j]->x-=vesicle->cm[0];
         vesicle->poly_list->poly[i]->vlist->vtx[j]->y-=vesicle->cm[1];
         vesicle->poly_list->poly[i]->vlist->vtx[j]->z-=vesicle->cm[2];
      }
    }


    vesicle->cm[0]=0;
    vesicle->cm[1]=0;
    vesicle->cm[2]=0;

    return TS_SUCCESS;
}

ts_bool cell_occupation(ts_vesicle *vesicle){
    ts_uint i,cellidx, n=vesicle->vlist->n;
    ts_double shift;
    ts_double dcell;
    shift=(ts_double) vesicle->clist->ncmax[0]/2;
    dcell=1.0/(1.0 + vesicle->stepsize);
    ts_uint i,j,cellidx, n=vesicle->vlist->n;
    //ts_double shift;
    //ts_double dcell;
    //shift=(ts_double) vesicle->clist->ncmax[0]/2;
    //dcell=1.0/(1.0 + vesicle->stepsize);
    //`fprintf(stderr, "Bil sem tu\n"); 

    cell_list_cell_occupation_clear(vesicle->clist);
    for(i=0;i<n;i++){
    cellidx=vertex_self_avoidance(vesicle, vesicle->vlist->vtx[i]);
    vesicle->vlist->vtx[i]->cell=vesicle->clist->cell[cellidx];
//   already done in cell_add_vertex
//    vesicle->vlist->vtx[i]->cell=vesicle->clist->cell[cellidx];

    cell_add_vertex(vesicle->clist->cell[cellidx],vesicle->vlist->vtx[i]);

    }

    for(i=0;i<vesicle->poly_list->n;i++){
   for(j=0;j<vesicle->poly_list->poly[i]->vlist->n;j++){
       cellidx=vertex_self_avoidance(vesicle, vesicle->poly_list->poly[i]->vlist->vtx[j]);
       cell_add_vertex(vesicle->clist->cell[cellidx],vesicle->poly_list->poly[i]->vlist->vtx[j]);
   }
    }

    

    //fprintf(stderr, "Bil sem tu\n"); 
   if(dcell);
   if(shift);
   //if(dcell);
   //if(shift);
    return TS_SUCCESS;
}