Started with arg parsing

Samo Penic

2014-03-06 083e03adeaf985c9da1ed31d259ced9bb54c207c

 src/main.c

@@ -21,6 +21,10 @@
int main(int argv, char *argc[]){
ts_uint inititer,mcsweeps, iterations;
ts_vesicle *vesicle, *vesicle1;


parse_args(argv,argc);

/* THIS SHOULD GO INTO UNIT TEST
ts_bool retval;
    ts_vertex_list *vlist=init_vertex_list(5);
@@ -64,19 +68,22 @@
vtx_list_free(vlist1);
printf("Tests complete.\n");
*/
if(force_from_tape){
ts_fprintf(stdout,"****************************************************\n");
ts_fprintf(stdout,"**** Reinitializing initial geometry from tape *****\n");
ts_fprintf(stdout,"****************************************************\n\n");
vesicle=parsetape(&mcsweeps, &inititer, &iterations);
} else {

ts_fprintf(stdout,"**********************************************************************\n");
ts_fprintf(stdout,"**** Recreating vesicle from dump file and continuing simulation *****\n");
ts_fprintf(stdout,"**********************************************************************\n\n");
vesicle1=parsetape(&mcsweeps, &inititer, &iterations);

/*Testing */
//vesicle->poly_list=init_poly_list(1400,20,vesicle->vlist);

//poly_list_free(vesicle->poly_list);
/*End testing*/

dump_state(vesicle1);

vesicle=restore_state();
//vesicle_free(vesicle1);
run_simulation(vesicle1, mcsweeps, inititer, iterations);
vesicle_free(vesicle1);
}

run_simulation(vesicle, mcsweeps, inititer, iterations);
write_master_xml_file("test.pvd");
write_dout_fcompat_file(vesicle,"dout");
vesicle_free(vesicle);