restoring vertices with spontaneous curvatures seems to work, however, the ...

Samo Penic

2016-07-03 def8b5262e183297ccee42ebbf9ebdb89c10f44c

 src/snapshot.c

@@ -32,6 +32,8 @@
   xml_trisurf_tria_neigh(data,vesicle->tlist);
   xml_trisurf_vtx_neigh(data,vesicle->vlist);   
   xml_trisurf_vtx_tristar(data,vesicle->vlist);
   xml_trisurf_nucleus(data,vesicle);
   xml_trisurf_constvolarea(data,V0,A0);
#ifdef COMPRESSION
   char *compressed;
   ts_uint nbytes=ts_compress_string64(data->string, data->beg-1, &compressed); //suppress null character at the end with by substracting 1
@@ -57,7 +59,7 @@
   fprintf(fh, "<trisurfversion>Trisurf (commit %s), compiled on %s %s</trisurfversion>\n",TS_VERSION, __DATE__,  __TIME__);
   fprintf(fh, "<dumpdate>%s</dumpdate>\n", c_time_string);

   fprintf(fh, "<tape>\n");
   fprintf(fh, "<tape>");
      fprintf(fh,"%s",tapetxt);   
   fprintf(fh, "</tape>\n");
   if(vesicle->poly_list!=NULL){
@@ -124,7 +126,18 @@
   return TS_SUCCESS;
}

ts_bool xml_trisurf_nucleus(ts_string *data, ts_vesicle* vesicle){
   if(vesicle->R_nucleus>0.0 || (vesicle->R_nucleusX>0.0 && vesicle->R_nucleusY>0.0 && vesicle->R_nucleusZ>0.0)){
      ts_sprintf(data,"<nucleus>%.17e %.17e %.17e</nucleus>",vesicle->nucleus_center[0], vesicle->nucleus_center[1], vesicle->nucleus_center[2]);
   }
   return TS_SUCCESS;
}
ts_bool xml_trisurf_constvolarea(ts_string *data, ts_double volume, ts_double area){
   ts_sprintf(data,"<constant_volume>%.17e</constant_volume>",volume);
   ts_sprintf(data,"<constant_area>%.17e</constant_area>",area);

   return TS_SUCCESS;
}


/* UTILITIES */