seems to work.

Samo Penic

2014-06-13 d27c077296c88b4a78288bed7454c3a60279c26e

 src/timestep.c

@@ -14,7 +14,7 @@
#include "vesicle.h"
#include<gsl/gsl_complex.h>
#include<gsl/gsl_complex_math.h>

#include "cross-section.h"

ts_bool run_simulation(ts_vesicle *vesicle, ts_uint mcsweeps, ts_uint inititer, ts_uint iterations, ts_uint start_iteration){
   ts_uint i, j,k,l,m;
@@ -24,6 +24,9 @@
   FILE *fd1,*fd2=NULL;
//    char filename[255];
   FILE *fd=fopen("statistics.csv","w");

   FILE *fdx;
   ts_coord_list *pts;
   if(fd==NULL){
      fatal("Cannot open statistics.csv file for writing",1);
   }
@@ -68,6 +71,13 @@
      if(i>=inititer){
         write_vertex_xml_file(vesicle,i-inititer);
         write_master_xml_file("test.pvd");
         fdx= fopen("test.txt","w");
         pts=get_crossection_with_plane(vesicle, 0.0,0.0,1.0,0.0);
         for(k=0;k<pts->n;k++){
            fprintf(fdx,"%e, %e, %e\n",pts->coord[k]->e1, pts->coord[k]->e2, pts->coord[k]->e3);
         }
         fclose(fdx);
         free(pts);
         epochtime=get_epoch();         
         gyration_eigen(vesicle, &l1, &l2, &l3);
         vesicle_volume(vesicle); //calculates just volume. Area is not added to ts_vesicle yet!