| | |
| | | #include "poly.h" |
| | | #include "sh.h" |
| | | #include "shcomplex.h" |
| | | #include "dumpstate.h" |
| | | |
| | | /** Entrance function to the program |
| | | * @param argv is a number of parameters used in program call (including the program name |
| | |
| | | force_from_tape=0; |
| | | parse_args(argv,argc); // sets global variable command_line_args (defined in io.h) |
| | | ts_fprintf(stdout,"Starting program...\n\n"); |
| | | if(command_line_args.force_from_tape){ |
| | | |
| | | if(command_line_args.dump_from_vtk[0]!=0){ |
| | | ts_fprintf(stdout,"************************************************\n"); |
| | | ts_fprintf(stdout,"***** Dumping vesicle from VTK points list *****\n"); |
| | | ts_fprintf(stdout,"************************************************\n\n"); |
| | | tape=parsetape(command_line_args.tape_fullfilename); |
| | | vesicle=vtk2vesicle(command_line_args.dump_from_vtk,tape); |
| | | } |
| | | else if(command_line_args.force_from_tape){ |
| | | ts_fprintf(stdout,"************************************************\n"); |
| | | ts_fprintf(stdout,"**** Generating initial geometry from tape *****\n"); |
| | | ts_fprintf(stdout,"************************************************\n\n"); |
| | | tape=parsetape("tape"); |
| | | tape=parsetape(command_line_args.tape_fullfilename); |
| | | vesicle=create_vesicle_from_tape(tape); |
| | | } else { |
| | | |
| | | ts_fprintf(stdout,"**********************************************************************\n"); |
| | | ts_fprintf(stdout,"**** Recreating vesicle from dump file and continuing simulation *****\n"); |
| | | ts_fprintf(stdout,"**********************************************************************\n\n"); |
| | | tape=parsetape("tape"); |
| | | tape=parsetape(command_line_args.tape_fullfilename); |
| | | vesicle=restore_state(&start_iteration); |
| | | if(vesicle==NULL){ |
| | | ts_fprintf(stderr, "Dump file does not exist or is not a regular file! Did you mean to invoke trisurf with --force-from-tape option?\n\n"); |
| | |
| | | } |
| | | |
| | | run_simulation(vesicle, tape->mcsweeps, tape->inititer, tape->iterations, start_iteration); |
| | | write_master_xml_file("test.pvd"); |
| | | write_master_xml_file(command_line_args.output_fullfilename); |
| | | write_dout_fcompat_file(vesicle,"dout"); |
| | | vesicle_free(vesicle); |
| | | tape_free(tape); |