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| | | #include "shcomplex.h" |
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| | | #include "dumpstate.h" |
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| | | #include "restore.h" |
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| | | |
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| | | #include "plugins.h" |
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| | | #include <fcntl.h> |
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| | | /** Entrance function to the program |
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| | | * @param argv is a number of parameters used in program call (including the program name |
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| | | * @param argc is a pointer to strings (character arrays) which holds the arguments |
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| | | * @returns returns 0 on success, any other number on fail. |
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| | | */ |
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| | | |
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| | | #include <string.h> |
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| | | int main(int argv, char *argc[]){ |
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| | | ts_char *plugin0 = (ts_char *)calloc(255,sizeof(ts_char)); |
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| | | ts_char *plugin1 = (ts_char *)calloc(255,sizeof(ts_char)); |
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| | | strcpy(plugin0,"/home/samo/programiranje/trisurf-ng/src/plugins/.libs/demoplugin.so"); |
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| | | strcpy(plugin1,"/home/samo/programiranje/trisurf-ng/src/plugins/.libs/vmdefaulthardconstraints.so"); |
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| | | ts_char **plugins=(ts_char **)calloc(2,sizeof(ts_char *)); |
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| | | *plugins=plugin0; |
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| | | plugins[1]=plugin1; |
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| | | ts_plugin_list *plist=init_plugin_list(plugins,2); |
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| | | ts_fprintf(stdout, "TRISURF in PRVI PLUGIN %s\n", plist->plugin[0]->details->name); |
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| | | ts_vesicle *vesicle; |
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| | | ts_tape *tape; |
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| | | ts_uint start_iteration=0; |
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| | | force_from_tape=0; |
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| | | /* Area and volume for constant area and constant volume are initialized to be zero */ |
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| | | A0=0; |
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| | | V0=0; |
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| | | /* create lock file */ |
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| | | createPidFile("ts_trisurf",".lock",0); |
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| | | parse_args(argv,argc); // sets global variable command_line_args (defined in io.h) |
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| | | ts_fprintf(stdout,"Programming done by: Samo Penic and Miha Fosnaric\n"); |
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| | | ts_fprintf(stdout,"Released under terms of GPLv3\n"); |
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| | | ts_fprintf(stdout,"Starting program...\n\n"); |
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| | | // vesicle = parseDump("timestep_000000.vtu"); |
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| | | // run_simulation(vesicle, vesicle->tape->mcsweeps, vesicle->tape->inititer, vesicle->tape->iterations, 1); |
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| | | |
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| | | /* Entry point for plugin function at_start() */ |
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| | | int i; |
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| | | for(i=0; i<plist->n; i++){ |
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| | | plist->plugin[i]->function->at_start(argv, argc); |
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| | | } |
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| | | |
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| | | if(command_line_args.dump_from_vtk[0]!=0){ |
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| | | ts_fprintf(stdout,"************************************************\n"); |
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| | |
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| | | if(fd!=NULL){ |
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| | | arguments_no=fscanf(fd,"%u", &start_iteration); |
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| | | if(arguments_no==0){ |
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| | | ts_fprintf(stdout,"No information of start iteration in .status file"); |
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| | | ts_fprintf(stdout,"No information of start iteration in .status file\n"); |
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| | | } |
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| | | fclose(fd); |
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| | | start_iteration++; |
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| | | start_iteration++; |
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| | | } |
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| | | else |
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| | | ts_fprintf(stdout,"No .status file. The iteration count will start from 0"); |
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| | | /* Here you should read new tape file, reassign some values in vertex from the tape and assign read tape to vesicle->tape */ |
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| | | // tape=parsetape(command_line_args.tape_fullfilename); |
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| | | // vesicle=vtk2vesicle(command_line_args.dump_from_vtk,tape); |
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| | | ts_fprintf(stdout,"No .status file. The iteration count will start from 0\n"); |
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| | | } |
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| | | else if(command_line_args.force_from_tape){ |
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| | | ts_fprintf(stdout,"************************************************\n"); |
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| | |
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| | | } |
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| | | } |
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| | | } |
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| | | //printf("nucleus coords: %.17e %.17e %.17e\n",vesicle->nucleus_center[0], vesicle->nucleus_center[1], vesicle->nucleus_center[2]); |
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| | | |
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| | | vesicle->plist=plist; |
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| | | /* Entry point for plugin after_vesicle_init() function */ |
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| | | for(i=0; i<plist->n; i++){ |
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| | | vesicle = plist->plugin[i]->function->after_vesicle_init(vesicle); |
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| | | } |
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| | | |
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| | | run_simulation(vesicle, tape->mcsweeps, tape->inititer, tape->iterations, start_iteration); |
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| | | write_master_xml_file(command_line_args.output_fullfilename); |
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| | | write_dout_fcompat_file(vesicle,"dout"); |
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