Merge branch 'Ylmi2sh'

Samo Penic

2012-06-07 3096998157b37ad4d6c1af9ce32e657407795d5d

 src/sh.c

@@ -6,20 +6,19 @@


ts_spharm *sph_init(ts_vertex_list *vlist, ts_uint l){
    ts_uint k,j;
    ts_uint j,i;
    ts_spharm *sph=(ts_spharm *)malloc(sizeof(ts_spharm));

    /* lets initialize Ylm for each vertex. Data is stored in vertices */
    for(k=0;k<vlist->n;k++){
            vlist->vtx[k]->Ylm=(ts_double **)calloc(l,sizeof(ts_double *));
    /* lets initialize Ylm for each vertex. */
    sph->Ylmi=(ts_double ***)calloc(l,sizeof(ts_double **));
    for(i=0;i<vlist->n;i++){
            sph->Ylmi[i]=(ts_double **)calloc(2*l+1,sizeof(ts_double *));
            for(j=0;j<l;j++){
                vlist->vtx[k]->Ylm[j]=(ts_double *)calloc(2*j+1,sizeof(ts_double));
                sph->Ylmi[i][j]=(ts_double *)calloc(vlist->n,sizeof(ts_double));
            }
    }
        

    /* lets initialize ulm */

    sph->ulm=(ts_double **)calloc(l,sizeof(ts_double *));
    for(j=0;j<l;j++){
        sph->ulm[j]=(ts_double *)calloc(2*j+1,sizeof(ts_double));
@@ -27,7 +26,6 @@


    /* lets initialize co */

    sph->co=(ts_double **)calloc(l,sizeof(ts_double *));
    for(j=0;j<l;j++){
        sph->co[j]=(ts_double *)calloc(2*j+1,sizeof(ts_double));
@@ -40,8 +38,8 @@
}


ts_bool sph_free(ts_spharm *sph, ts_vertex_list *vlist){
    int i,k;
ts_bool sph_free(ts_spharm *sph){
    int i,j;
    for(i=0;i<sph->l;i++){
        if(sph->ulm[i]!=NULL) free(sph->ulm[i]);
        if(sph->co[i]!=NULL) free(sph->co[i]);
@@ -49,14 +47,18 @@
    if(sph->co != NULL) free(sph->co);
    if(sph->ulm !=NULL) free(sph->ulm);

    for(k=0;k<vlist->n;k++){
        if(vlist->vtx[k]->Ylm!=NULL) {
        if(sph->Ylmi!=NULL) {
            for(i=0;i<sph->l;i++){
                if(vlist->vtx[k]->Ylm[i]!=NULL) free(vlist->vtx[k]->Ylm[i]);
                if(sph->Ylmi[i]!=NULL){
                    for(j=0;j<sph->l*2+1;j++){
                        if(sph->Ylmi[i][j]!=NULL) free (sph->Ylmi[i][j]);
            }
            free(vlist->vtx[k]->Ylm);
                    free(sph->Ylmi[i]);
        }
    }
            free(sph->Ylmi);
        }

    free(sph);
    return TS_SUCCESS;
}
@@ -271,17 +273,17 @@
    ts_vertex *cvtx;
    for(k=0;k<vesicle->vlist->n;k++){
        cvtx=vesicle->vlist->vtx[k];
        cvtx->Ylm[0][0]=sqrt(1.0/4.0/M_PI);
        sph->Ylmi[0][0][k]=sqrt(1.0/4.0/M_PI);
        cart2sph(coord,cvtx->x, cvtx->y, cvtx->z);
        fi=coord->e2;
        theta=coord->e3; 
        for(i=0; i<sph->l; i++){
            for(j=0;j<i;j++){
                cvtx->Ylm[i][j]=sph->co[i][j]*cos((j-i-1)*fi)*pow(-1,j-i-1)*plgndr(i,abs(j-i-1),cos(theta));
                sph->Ylmi[i][j][k]=sph->co[i][j]*cos((j-i-1)*fi)*pow(-1,j-i-1)*plgndr(i,abs(j-i-1),cos(theta));
            }
                cvtx->Ylm[i][j+1]=sph->co[i][j+1]*plgndr(i,0,cos(theta));
                sph->Ylmi[i][j+1][k]=sph->co[i][j+1]*plgndr(i,0,cos(theta));
            for(j=sph->l;j<2*i;j++){
                cvtx->Ylm[i][j]=sph->co[i][j]*sin((j-i-1)*fi)*plgndr(i,j-i-1,cos(theta));
                sph->Ylmi[i][j][k]=sph->co[i][j]*sin((j-i-1)*fi)*plgndr(i,j-i-1,cos(theta));
            }
        }

@@ -306,7 +308,7 @@
        cvtx=vesicle->vlist->vtx[k];
        for(i=0;i<vesicle->sphHarmonics->l;i++){
            for(j=0;j<2*i;j++){
                vesicle->sphHarmonics->ulm[i][j]+= cvtx->solAngle*cvtx->relR*cvtx->Ylm[i][j];
                vesicle->sphHarmonics->ulm[i][j]+= cvtx->solAngle*cvtx->relR*vesicle->sphHarmonics->Ylmi[i][j][k];
            }

        }