| | |
| | | /* vim: set ts=4 sts=4 sw=4 noet : */ |
| | | #ifndef _GENERAL_H |
| | | #define _GENERAL_H |
| | | |
| | |
| | | ts_double projArea; |
| | | ts_double relR; |
| | | ts_double solAngle; |
| | | struct ts_poly *grafted_poly; |
| | | struct ts_poly *grafted_poly; |
| | | struct ts_cluster *cluster; |
| | | }; |
| | | typedef struct ts_vertex ts_vertex; |
| | | |
| | |
| | | |
| | | |
| | | |
| | | typedef struct { |
| | | long int nshell; |
| | | long int ncxmax; |
| | | long int ncymax; |
| | | long int nczmax; |
| | | long int npoly; |
| | | long int nmono; |
| | | long int nfil; |
| | | long int nfono; |
| | | long int R_nucleus; |
| | | ts_double R_nucleusX; |
| | | ts_double R_nucleusY; |
| | | ts_double R_nucleusZ; |
| | | long int pswitch; |
| | | long int constvolswitch; |
| | | long int constareaswitch; |
| | | ts_double constvolprecision; |
| | | char *multiprocessing; |
| | | long int brezveze0; |
| | | long int brezveze1; |
| | | long int brezveze2; |
| | | ts_double xk0; |
| | | ts_double dmax; |
| | | ts_double dmin_interspecies; |
| | | ts_double stepsize; |
| | | ts_double kspring; |
| | | ts_double xi; |
| | | ts_double pressure; |
| | | long int iterations; |
| | | long int inititer; |
| | | long int mcsweeps; |
| | | long int quiet; |
| | | long int shc; |
| | | } ts_tape; |
| | | |
| | | |
| | | |
| | | |
| | | typedef struct { |
| | | ts_vertex_list *vlist; |
| | |
| | | ts_double spring_constant; |
| | | ts_double pressure; |
| | | ts_int pswitch; |
| | | |
| | | ts_tape *tape; |
| | | ts_double R_nucleus; |
| | | |
| | | ts_double R_nucleusX; |
| | | ts_double R_nucleusY; |
| | | ts_double R_nucleusZ; |
| | | ts_double nucleus_center[3]; |
| | | ts_double area; |
| | | } ts_vesicle; |
| | | |
| | | |
| | | |
| | | struct ts_cluster{ |
| | | ts_uint nvtx; |
| | | ts_uint idx; |
| | | ts_vertex **vtx; |
| | | }; |
| | | |
| | | typedef struct ts_cluster ts_cluster; |
| | | |
| | | typedef struct{ |
| | | ts_uint n; |
| | | ts_cluster **cluster; |
| | | } ts_cluster_list; |
| | | |
| | | |
| | | /* GLOBAL VARIABLES */ |
| | | |
| | | int quiet; |
| | | |
| | | |
| | | ts_double V0; |
| | | ts_double A0; |
| | | ts_double epsvol; |
| | | ts_double epsarea; |
| | | /* FUNCTIONS */ |
| | | |
| | | /** Non-fatal error function handler: |
| | |
| | | #define VTX(n) &(vlist->vtx[n]) |
| | | #define VTX_DATA(n) vlist->vtx[n].data |
| | | |
| | | |
| | | /* FOR PID GENERATION ROUTINE */ |
| | | #define CPF_CLOEXEC 1 |
| | | |
| | | int createPidFile(const char *progName, const char *pidFile, int flags); |
| | | |
| | | int lockRegion(int fd, int type, int whence, int start, int len); |
| | | #endif |