Moved all global variables to separate file and defined extern keyword wher...

Samo Penic

2022-05-04 06afc729f9061c1cfa14c78728d61d518324c2f0

 src/bond.c

@@ -1,3 +1,4 @@
/* vim: set ts=4 sts=4 sw=4 noet : */
#include<stdlib.h>
#include "general.h"
#include "vertex.h"
@@ -22,18 +23,30 @@
   blist->n++;
   blist->bond=(ts_bond **)realloc(blist->bond,blist->n*sizeof(ts_bond *));
   if(blist->bond==NULL) fatal("Cannot reallocate memory for additional **ts_bond.",100);
    blist->bond[blist->n-1]=(ts_bond *)malloc(sizeof(ts_bond));
    blist->bond[blist->n-1]=(ts_bond *)calloc(1,sizeof(ts_bond));
    if(blist->bond[blist->n-1]==NULL) fatal("Cannot allocate memory for additional *ts_bond.",100);
    
   //NOW insert vertices into data!   
   blist->bond[blist->n - 1]->vtx1=vtx1;   
   blist->bond[blist->n - 1]->vtx2=vtx2;
   blist->bond[blist->n - 1]->tainted=0;
   blist->bond[blist->n - 1]->idx=blist->n-1;
    //Should we calculate bond length NOW?
   
   return blist->bond[blist->n-1];
}


ts_bool bond_vector(ts_bond *bond){
	
   bond->x = bond->vtx1->x - bond->vtx2->x;
   bond->y = bond->vtx1->y - bond->vtx2->y;
   bond->z = bond->vtx1->z - bond->vtx2->z;

   return TS_SUCCESS;	
}


ts_bool bond_list_free(ts_bond_list *blist){
    ts_uint i;
    for(i=0;i<blist->n;i++){