Trisurf Monte Carlo simulator
Samo Penic
2019-02-27 51b4f09bca802c4941700c78c5733ce968ddc7c6
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/* This is a first attempt in implementation of plugins to Trisurf-ng. */
 
/*
 
Options for tape:
 
extra_plugin_path = "..." (OPTIONAL)
 
vesicle bipyramid {
    nshell=23    
}
 
vesicle vtufile {
    filename="filename"
}
 
vesicle vtudatabase {
    run_id=123
    timestep=999
}
 
vesicle properties {
    xk0=20
    dmax=1.7
    dmin_interspecies=1.2
    stepsize=0.15
}
 
space properties {
    nxmax=60
    nymax=60
    nzmax=60
}
 
loop control {
    inner=1000
    outer=1000
}
 
plugin pressure {
    pressure=10
}
 
plugin constant_volume {
    precision=1e14
}
 
plugin constant_area {
 
}
 
plugin confinement_plate {
    distance=5
    force=10
    coordinate=2 // 0=x,1=y,2=z
}
 
plugin spherical_harmonics {
    lmax=21
    filename="abc.csv"
}
 
plugin spontaneous_curvature {
    c0=2
    N=100
    w=10
    force=3
}
 
plugin filament {
    monomers=100
    xi=10
}
 
plugin polymer {
    polymers = 100
    monomers = 10
    elastic_coefficient=100
    is_internal = true
}
 
plugin nucleus {
    R_nucleus=10
    R_nucleusX=0
    R_nucleusY=0
    R_nucleusZ=0
}
 
*/
#include "plugins.h"
#include <stdlib.h>
#include <dlfcn.h>
#include <string.h>
#include "general.h"
 
ts_plugin *init_plugin(ts_char *filename){
    ts_plugin *plugin = (ts_plugin *)calloc(1, sizeof(ts_plugin));
    plugin->filename=(ts_char *)calloc(strlen(filename),sizeof(ts_char));
    strcpy(plugin->filename,filename);
    plugin->libhandle = dlopen(plugin->filename, RTLD_NOW);
    if(!plugin->libhandle){
        ts_fprintf(stderr,"Error loading plugin: %s\n", filename);
        fatal("Exiting",235);
    }
    ts_plugin_details* (*get_plugin_details)(void) = dlsym(plugin->libhandle, "init");
    plugin->details = get_plugin_details();
    plugin->function = (ts_plugin_function *)calloc(1,sizeof(ts_plugin_function));
    
    plugin->function->cleanup = dlsym(plugin->libhandle, "cleanup");
    plugin->function->at_start = dlsym(plugin->libhandle, "at_start");
    plugin->function->after_vesicle_init = dlsym(plugin->libhandle, "after_vesicle_init");
    plugin->function->vm_hard_constraint = dlsym(plugin->libhandle, "vm_hard_constraint");
    plugin->function->vm_energy_before_prepare = dlsym(plugin->libhandle, "vm_energy_before_prepare");
    plugin->function->vm_energy_before_execute = dlsym(plugin->libhandle, "vm_energy_before_execute");
    plugin->function->vm_energy_after_prepare = dlsym(plugin->libhandle, "vm_energy_after_prepare");
    plugin->function->vm_energy_after_execute = dlsym(plugin->libhandle, "vm_energy_after_execute");
    plugin->function->vm_new_state_rejected = dlsym(plugin->libhandle, "vm_new_state_rejected");
    plugin->function->vm_new_state_accepted = dlsym(plugin->libhandle, "vm_new_state_accepted");
 
    return plugin;
}
 
 
ts_plugin_list *init_plugin_list(ts_char **plugin_filenames, ts_uint number_of_plugins){
    ts_plugin_list *plist=(ts_plugin_list *)calloc(1, sizeof(ts_plugin_list));
    plist->plugin=(ts_plugin **)calloc(number_of_plugins, sizeof(ts_plugin *));
    for(int i=0;i<number_of_plugins;i++){
        plist->plugin[i]=init_plugin(plugin_filenames[i]);
    }
    plist->n=number_of_plugins;
    return plist;
}    
 
void free_plugin(ts_plugin *plugin){
    plugin->function->cleanup();
    free(plugin->function);
    free(plugin->details);
    free(plugin->filename);
    dlclose(plugin->libhandle);
    free(plugin);
}
 
void free_plugin_list(ts_plugin_list *plist){
    for(int i=0;i<plist->n;i++){
        free_plugin(plist->plugin[i]);
    }
    free(plist);
}