| commit | author | age | ||
| 262607 | 1 | #include<stdio.h> |
| SP | 2 | #include<math.h> |
| 3 | #include "general.h" | |
| 4 | #include "vertex.h" | |
| 5 | #include "bond.h" | |
| 6 | #include "triangle.h" | |
| 7 | #include "cell.h" | |
| 8 | #include "vesicle.h" | |
| 9 | #include "io.h" | |
| 10 | #include "initial_distribution.h" | |
| 11 | #include "frame.h" | |
| 12 | #include "timestep.h" | |
| 13 | #include "sh.h" | |
| 14 | ||
| 15 | /** Entrance function to the program | |
| 16 | * @param argv is a number of parameters used in program call (including the program name | |
| 17 | * @param argc is a pointer to strings (character arrays) which holds the arguments | |
| 18 | * @returns returns 0 on success, any other number on fail. | |
| 19 | */ | |
| 20 | ts_bool saveAvgUlm2(ts_vesicle *vesicle); | |
| 21 | int main(int argv, char *argc[]){ | |
| a63f17 | 22 | ts_uint i,j,k; |
| 262607 | 23 | ts_vesicle *vesicle; |
| SP | 24 | ts_double r0; |
| 25 | vesicle=initial_distribution_dipyramid(17,60,60,60,0.15); | |
| 26 | //parsetape(vesicle,&i); | |
| 27 | ||
| 59c7f5 | 28 | //similar to nmax in fortran code |
| M | 29 | ts_uint nmax; |
| 30 | ||
| 262607 | 31 | //these four must come from parsetype! |
| SP | 32 | vesicle->dmax=1.67*1.67; |
| 33 | vesicle->stepsize=0.15; | |
| 34 | vesicle->clist->max_occupancy=8; | |
| 35 | vesicle->bending_rigidity=25.0; | |
| 36 | //fprintf(stderr,"xk=%f",vesicle->bending_rigidity); | |
| 37 | ||
| 919555 | 38 | centermass(vesicle); |
| a63f17 | 39 | cell_occupation(vesicle); |
| SP | 40 | |
| 41 | //test if the structure is internally organized into cells correctly | |
| 42 | ts_uint cind; | |
| 43 | for(i=0;i<vesicle->vlist->n;i++){ | |
| 44 | cind=vertex_self_avoidance(vesicle, vesicle->vlist->vtx[i]); | |
| 45 | ||
| 46 | if(vesicle->clist->cell[cind]==vesicle->vlist->vtx[i]->cell){ | |
| 47 | //fprintf(stdout,"(T) Idx match!\n"); | |
| 48 | } else { | |
| 49 | fprintf(stderr,"(T) ***** Idx don't match!\n"); | |
| 50 | ||
| 51 | } | |
| 52 | } | |
| 53 | //end test | |
| 262607 | 54 | vesicle->sphHarmonics=sph_init(vesicle->vlist, 21); |
| SP | 55 | |
| 56 | vesicle_volume(vesicle); | |
| 57 | r0=getR0(vesicle); | |
| 58 | ||
| 59 | preparationSh(vesicle,r0); | |
| 60 | calculateYlmi(vesicle); | |
| 61 | calculateUlm(vesicle); | |
| 62 | ||
| 60bc6a | 63 | //preloop: |
| 37d14a | 64 | ts_double vmsr, bfsr; |
| 60bc6a | 65 | for(i=0;i<1000;i++){ |
| M | 66 | cell_occupation(vesicle); |
| 67 | for(j=0;j<1000;j++){ | |
| 37d14a | 68 | single_timestep(vesicle, &vmsr, &bfsr); |
| 60bc6a | 69 | } |
| M | 70 | centermass(vesicle); |
| 71 | fprintf(stderr, "Preloop %d completed.\n",i+1); | |
| 72 | } | |
| 73 | ||
| 59c7f5 | 74 | nmax=1000; |
| M | 75 | for(i=0;i<nmax;i++){ |
| 672ae4 | 76 | for(j=0;j<200;j++){ |
| a63f17 | 77 | cell_occupation(vesicle); |
| SP | 78 | for(k=0;k<5;k++){ |
| 37d14a | 79 | single_timestep(vesicle, &vmsr, &bfsr); |
| a63f17 | 80 | } |
| SP | 81 | centermass(vesicle); |
| 262607 | 82 | } |
| 919555 | 83 | vesicle_volume(vesicle); |
| SP | 84 | r0=getR0(vesicle); |
| 262607 | 85 | |
| 919555 | 86 | preparationSh(vesicle,r0); |
| SP | 87 | calculateYlmi(vesicle); |
| 88 | calculateUlm(vesicle); | |
| 262607 | 89 | |
| 919555 | 90 | storeUlm2(vesicle); |
| SP | 91 | saveAvgUlm2(vesicle); |
| 262607 | 92 | |
| SP | 93 | write_vertex_xml_file(vesicle,i); |
| 59c7f5 | 94 | fprintf(stderr, "Loop %d out of %d completed.\n",i+1,nmax); |
| a63f17 | 95 | |
| 262607 | 96 | } |
| a63f17 | 97 | |
| 262607 | 98 | write_master_xml_file("test.pvd"); |
| SP | 99 | write_dout_fcompat_file(vesicle,"dout"); |
| 100 | vesicle_free(vesicle); | |
| 101 | ||
| 102 | return 0; //program finished perfectly ok. We return 0. | |
| 103 | } | |
| 104 | ||
| 105 | ||
| 106 | ||
