| commit | author | age | ||
| 7f6076 | 1 | /* vim: set ts=4 sts=4 sw=4 noet : */ |
| d7639a | 2 | #ifndef _IO_H |
| SP | 3 | #define _IO_H |
| 7b0c07 | 4 | #include <confuse.h> |
| 083e03 | 5 | /** @ Global variables for I/O operations like filenames etc. */ |
| SP | 6 | /*static char mastername[1024]; |
| 7 | static char prefixname[1024]; | |
| 8 | static ts_bool restore=0; | |
| 9 | static char tape[1024]; */ | |
| 10 | int force_from_tape; | |
| 698ae1 | 11 | char tapetxt[128000]; //stores text file of the tape |
| 8a6614 | 12 | typedef struct{ |
| SP | 13 | ts_int force_from_tape; |
| 14 | ts_int reset_iteration_count; | |
| 3f5c83 | 15 | char path[1024]; //path where all files should be added |
| SP | 16 | char output_fullfilename[1024]; //name of the master file |
| 17 | char dump_fullfilename[1024]; //name of the dump file | |
| 18 | char tape_fullfilename[1024]; //name of the tape file | |
| 1bf3c3 | 19 | char tape_templatefull[1024]; //name of the tape template file |
| 7b0c07 | 20 | char tape_opts[1000]; //commandline tape options |
| ee84bd | 21 | char dump_from_vtk[1024]; |
| 8a6614 | 22 | } ts_args; |
| SP | 23 | |
| 24 | ts_args command_line_args; | |
| 25 | ||
| 083e03 | 26 | ts_bool parse_args(int argc, char **argv); |
| SP | 27 | |
| 28 | ||
| 29 | ||
| d7639a | 30 | /** @brief Prints the position of vertices for the whole list |
| SP | 31 | * |
| 32 | * The function is meant more or less as a debug tool, but can be used in production | |
| 33 | * environment aswell. | |
| 34 | * the output is in form of idx: x y z | |
| 35 | * @param *vlist is a structure holding information on vertex list. | |
| 36 | * @returns TS_SUCCESS on successful execution, TS_FAIL otherwise. | |
| 37 | */ | |
| 38 | ||
| 39 | ts_bool print_vertex_list(ts_vertex_list *vlist); | |
| 40 | ||
| 41 | /** @brief Prints the neighbours of all the vertices | |
| 42 | * | |
| 43 | * The function is meant more or less as a debug tool, but can be used in production | |
| 44 | * environment aswell. | |
| 45 | * the output is in form of idx(number of neighbours): (x1,y1,z1) (x2,y2,z2) ... | |
| 46 | * @param *vlist is a structure holding information on vertex list. | |
| 47 | * @returns TS_SUCCESS on successful execution, TS_FAIL otherwise. | |
| 48 | */ | |
| 49 | ts_bool print_vertex_neighbours(ts_vertex_list *vlist); | |
| 50 | ||
| 51 | ||
| 52 | /** @brief Function outputs the vetex list file to comply to old fortran format | |
| 53 | * | |
| 54 | * @param *vlist is a list of vertices | |
| 55 | * @param *filename is a name of the output file to be created (note that if the file already | |
| 56 | * exists it will be overwritten. | |
| 57 | */ | |
| 58 | ts_bool write_vertex_fcompat_file(ts_vertex_list *vlist,ts_char *filename); | |
| 59 | ts_bool fprint_vertex_list(FILE *fh,ts_vertex_list *vlist); | |
| 60 | ts_bool fprint_tristar(FILE *fh, ts_vesicle *vesicle); | |
| 61 | ts_bool fprint_triangle_list(FILE *fh, ts_vesicle *vesicle); | |
| 62 | ts_bool fprint_vertex_data(FILE *fh,ts_vertex_list *vlist); | |
| 63 | ts_bool fprint_bonds(FILE *fh,ts_vesicle *vesicle); | |
| 64 | ts_bool write_dout_fcompat_file(ts_vesicle *vesicle, ts_char *filename); | |
| 65 | ts_bool read_tape_fcompat_file(ts_vesicle *vesicle, ts_char *filename); | |
| 66 | ||
| 67 | ||
| 68 | /** @brief Outputs file in vtk format, compatible with paraview. | |
| 69 | * | |
| 70 | * @param *vlist is a list of vertices | |
| 71 | * @param *filename is a name of the output file. If exists, it will be overwritten | |
| 72 | * @param *text is a description line (max. 255 characters) to be included in the file | |
| 73 | */ | |
| 74 | ts_bool write_vertex_vtk_file(ts_vesicle *vesicle,ts_char *filename, ts_char *text); | |
| a6b1b5 | 75 | ts_bool write_vertex_xml_file(ts_vesicle *vesicle, ts_uint timestepno); |
| SP | 76 | ts_bool write_master_xml_file(ts_char *filename); |
| 144784 | 77 | ts_bool write_pov_file(ts_vesicle *vesicle, char *filename); |
| SP | 78 | |
| 1ab449 | 79 | ts_tape *parsetape(char *filename); |
| 698ae1 | 80 | ts_tape *parsetapebuffer(char *buffer); |
| 1ab449 | 81 | ts_bool tape_free(ts_tape *tape); |
| 7b0c07 | 82 | ts_bool getcmdline_tape(cfg_t *cfg, char *opts); |
| SP | 83 | ts_bool cmdline_to_tape(cfg_t *cfg, char *key, char *val); |
| ba73ab | 84 | ts_bool print_help(FILE *fd); |
| 1ab449 | 85 | ts_bool dump_state(ts_vesicle *vesicle, ts_uint iteration); |
| SP | 86 | ts_vesicle *restore_state(ts_uint *iteration); |
| d7639a | 87 | #endif |
