| commit | author | age | ||
| 262607 | 1 | #include<stdio.h> |
| SP | 2 | #include<math.h> |
| 3 | #include "general.h" | |
| 4 | #include "vertex.h" | |
| 5 | #include "bond.h" | |
| 6 | #include "triangle.h" | |
| 7 | #include "cell.h" | |
| 8 | #include "vesicle.h" | |
| 9 | #include "io.h" | |
| 10 | #include "initial_distribution.h" | |
| 11 | #include "frame.h" | |
| 12 | #include "timestep.h" | |
| 13 | #include "sh.h" | |
| 14 | ||
| 15 | /** Entrance function to the program | |
| 16 | * @param argv is a number of parameters used in program call (including the program name | |
| 17 | * @param argc is a pointer to strings (character arrays) which holds the arguments | |
| 18 | * @returns returns 0 on success, any other number on fail. | |
| 19 | */ | |
| 20 | ts_bool saveAvgUlm2(ts_vesicle *vesicle); | |
| 21 | int main(int argv, char *argc[]){ | |
| a63f17 | 22 | ts_uint i,j,k; |
| 262607 | 23 | ts_vesicle *vesicle; |
| SP | 24 | ts_double r0; |
| 25 | vesicle=initial_distribution_dipyramid(17,60,60,60,0.15); | |
| 26 | //parsetape(vesicle,&i); | |
| 27 | ||
| 59c7f5 | 28 | //similar to nmax in fortran code |
| M | 29 | ts_uint nmax; |
| 30 | ||
| 262607 | 31 | //these four must come from parsetype! |
| SP | 32 | vesicle->dmax=1.67*1.67; |
| 33 | vesicle->stepsize=0.15; | |
| 34 | vesicle->clist->max_occupancy=8; | |
| 35 | vesicle->bending_rigidity=25.0; | |
| 36 | //fprintf(stderr,"xk=%f",vesicle->bending_rigidity); | |
| 37 | ||
| 919555 | 38 | centermass(vesicle); |
| a63f17 | 39 | cell_occupation(vesicle); |
| SP | 40 | |
| 41 | //test if the structure is internally organized into cells correctly | |
| 42 | ts_uint cind; | |
| 43 | for(i=0;i<vesicle->vlist->n;i++){ | |
| 44 | cind=vertex_self_avoidance(vesicle, vesicle->vlist->vtx[i]); | |
| 45 | ||
| 46 | if(vesicle->clist->cell[cind]==vesicle->vlist->vtx[i]->cell){ | |
| 47 | //fprintf(stdout,"(T) Idx match!\n"); | |
| 48 | } else { | |
| 49 | fprintf(stderr,"(T) ***** Idx don't match!\n"); | |
| 50 | ||
| 51 | } | |
| 52 | } | |
| 53 | //end test | |
| 262607 | 54 | vesicle->sphHarmonics=sph_init(vesicle->vlist, 21); |
| SP | 55 | |
| 56 | vesicle_volume(vesicle); | |
| 57 | r0=getR0(vesicle); | |
| 58 | ||
| 59 | preparationSh(vesicle,r0); | |
| 60 | calculateYlmi(vesicle); | |
| 61 | calculateUlm(vesicle); | |
| 62 | ||
| 60bc6a | 63 | //preloop: |
| M | 64 | for(i=0;i<1000;i++){ |
| 65 | cell_occupation(vesicle); | |
| 66 | for(j=0;j<1000;j++){ | |
| 67 | single_timestep(vesicle); | |
| 68 | } | |
| 69 | centermass(vesicle); | |
| 70 | fprintf(stderr, "Preloop %d completed.\n",i+1); | |
| 71 | } | |
| 72 | ||
| 59c7f5 | 73 | nmax=1000; |
| M | 74 | for(i=0;i<nmax;i++){ |
| 672ae4 | 75 | for(j=0;j<200;j++){ |
| a63f17 | 76 | cell_occupation(vesicle); |
| SP | 77 | for(k=0;k<5;k++){ |
| 262607 | 78 | single_timestep(vesicle); |
| a63f17 | 79 | } |
| SP | 80 | centermass(vesicle); |
| 262607 | 81 | } |
| 919555 | 82 | vesicle_volume(vesicle); |
| SP | 83 | r0=getR0(vesicle); |
| 262607 | 84 | |
| 919555 | 85 | preparationSh(vesicle,r0); |
| SP | 86 | calculateYlmi(vesicle); |
| 87 | calculateUlm(vesicle); | |
| 262607 | 88 | |
| 919555 | 89 | storeUlm2(vesicle); |
| SP | 90 | saveAvgUlm2(vesicle); |
| 262607 | 91 | |
| SP | 92 | write_vertex_xml_file(vesicle,i); |
| 59c7f5 | 93 | fprintf(stderr, "Loop %d out of %d completed.\n",i+1,nmax); |
| a63f17 | 94 | |
| 262607 | 95 | } |
| a63f17 | 96 | |
| 262607 | 97 | write_master_xml_file("test.pvd"); |
| SP | 98 | write_dout_fcompat_file(vesicle,"dout"); |
| 99 | vesicle_free(vesicle); | |
| 100 | ||
| 101 | return 0; //program finished perfectly ok. We return 0. | |
| 102 | } | |
| 103 | ||
| 104 | ||
| 105 | ||
| 106 | ts_bool saveAvgUlm2(ts_vesicle *vesicle){ | |
| 107 | ||
| 108 | FILE *fh; | |
| 109 | ||
| 110 | fh=fopen("sph2out.dat", "w"); | |
| 111 | if(fh==NULL){ | |
| 112 | err("Cannot open file %s for writing"); | |
| 113 | return TS_FAIL; | |
| 114 | } | |
| 115 | ||
| 116 | ts_spharm *sph=vesicle->sphHarmonics; | |
| 117 | ts_int i,j; | |
| 118 | fprintf(fh,"l,\tm,\tulm^2avg\n"); | |
| 119 | for(i=0;i<sph->l;i++){ | |
| 120 | for(j=0;j<2*i+1;j++){ | |
| 121 | fprintf(fh,"%d,\t%d,\t%e\n", i, j-i, sph->sumUlm2[i][j]/(ts_double)sph->N); | |
| 122 | ||
| 123 | } | |
| 443ba1 | 124 | fprintf(fh,"\n"); |
| 262607 | 125 | } |
| SP | 126 | fclose(fh); |
| 127 | return TS_SUCCESS; | |
| 128 | } | |
