| commit | author | age | ||
| 7f6076 | 1 | /* vim: set ts=4 sts=4 sw=4 noet : */ |
| d7639a | 2 | #include<stdio.h> |
| SP | 3 | #include<math.h> |
| 2b14da | 4 | #include<stdlib.h> |
| d7639a | 5 | #include "general.h" |
| SP | 6 | #include "vertex.h" |
| a10dd5 | 7 | #include "bond.h" |
| a2a676 | 8 | #include "triangle.h" |
| bb77ca | 9 | #include "cell.h" |
| 7958e9 | 10 | #include "vesicle.h" |
| a6b1b5 | 11 | #include "io.h" |
| 7958e9 | 12 | #include "initial_distribution.h" |
| dac2e5 | 13 | #include "frame.h" |
| aec47d | 14 | #include "timestep.h" |
| 8db569 | 15 | #include "poly.h" |
| dc77e8 | 16 | #include "sh.h" |
| 459ff9 | 17 | #include "shcomplex.h" |
| ee84bd | 18 | #include "dumpstate.h" |
| 8c1bb1 | 19 | #include "restore.h" |
| 6e42ef | 20 | |
| SP | 21 | #include <fcntl.h> |
| d7639a | 22 | /** Entrance function to the program |
| SP | 23 | * @param argv is a number of parameters used in program call (including the program name |
| 24 | * @param argc is a pointer to strings (character arrays) which holds the arguments | |
| 25 | * @returns returns 0 on success, any other number on fail. | |
| 26 | */ | |
| 27 | ||
| 28 | int main(int argv, char *argc[]){ | |
| 3c6e26 | 29 | ts_vesicle *vesicle=NULL; |
| SP | 30 | ts_tape *tape=NULL; |
| 8a6614 | 31 | ts_uint start_iteration=0; |
| 152052 | 32 | force_from_tape=0; |
| fab2ad | 33 | /* Area and volume for constant area and constant volume are initialized to be zero */ |
| SP | 34 | A0=0; |
| 35 | V0=0; | |
| 6e42ef | 36 | /* create lock file */ |
| SP | 37 | createPidFile("ts_trisurf",".lock",0); |
| 8a6614 | 38 | parse_args(argv,argc); // sets global variable command_line_args (defined in io.h) |
| 7f6076 | 39 | ts_fprintf(stdout,"TRISURF-NG v. %s, compiled on: %s %s.\n", TS_VERSION, __DATE__, __TIME__); |
| SP | 40 | ts_fprintf(stdout,"Programming done by: Samo Penic and Miha Fosnaric\n"); |
| 41 | ts_fprintf(stdout,"Released under terms of GPLv3\n"); | |
| 8a6614 | 42 | ts_fprintf(stdout,"Starting program...\n\n"); |
| ab798b | 43 | // vesicle = parseDump("timestep_000000.vtu"); |
| SP | 44 | // run_simulation(vesicle, vesicle->tape->mcsweeps, vesicle->tape->inititer, vesicle->tape->iterations, 1); |
| 45 | ||
| ee84bd | 46 | if(command_line_args.dump_from_vtk[0]!=0){ |
| SP | 47 | ts_fprintf(stdout,"************************************************\n"); |
| 57f830 | 48 | ts_fprintf(stdout,"**** Restoring vesicle from VTK points list ****\n"); |
| ee84bd | 49 | ts_fprintf(stdout,"************************************************\n\n"); |
| ab798b | 50 | vesicle = parseDump(command_line_args.dump_from_vtk); |
| 3cd5f4 | 51 | // write_vertex_xml_file(vesicle,9999); // here you can test if restoration and rewritting results in the same dump file. Only the date od creation of dump file must differ. |
| ab798b | 52 | tape = vesicle->tape; |
| bb2074 | 53 | int arguments_no; |
| 3d0247 | 54 | FILE *fd=fopen(".status","r"); |
| SP | 55 | if(fd!=NULL){ |
| bb2074 | 56 | arguments_no=fscanf(fd,"%u", &start_iteration); |
| SP | 57 | if(arguments_no==0){ |
| a17e91 | 58 | ts_fprintf(stdout,"No information of start iteration in .status file\n"); |
| bb2074 | 59 | } |
| 3d0247 | 60 | fclose(fd); |
| a17e91 | 61 | start_iteration++; |
| 3d0247 | 62 | } |
| bb2074 | 63 | else |
| a17e91 | 64 | ts_fprintf(stdout,"No .status file. The iteration count will start from 0\n"); |
| ee84bd | 65 | } |
| SP | 66 | else if(command_line_args.force_from_tape){ |
| 8a6614 | 67 | ts_fprintf(stdout,"************************************************\n"); |
| SP | 68 | ts_fprintf(stdout,"**** Generating initial geometry from tape *****\n"); |
| 69 | ts_fprintf(stdout,"************************************************\n\n"); | |
| 267db5 | 70 | tape=parsetape(command_line_args.tape_fullfilename); |
| 8a6614 | 71 | vesicle=create_vesicle_from_tape(tape); |
| SP | 72 | } else { |
| 083e03 | 73 | |
| 8a6614 | 74 | ts_fprintf(stdout,"**********************************************************************\n"); |
| SP | 75 | ts_fprintf(stdout,"**** Recreating vesicle from dump file and continuing simulation *****\n"); |
| 76 | ts_fprintf(stdout,"**********************************************************************\n\n"); | |
| 3c6e26 | 77 | ts_fprintf(stderr, "Dump file does not exist or is not a regular file! Did you mean to invoke trisurf with --force-from-tape or --restore-from-vtk option?\n\n"); |
| SP | 78 | fatal("Recreating vesicle from binary dump file not supported anymore. Sorry.",254); |
| 8a6614 | 79 | } |
| SP | 80 | run_simulation(vesicle, tape->mcsweeps, tape->inititer, tape->iterations, start_iteration); |
| 81 | vesicle_free(vesicle); | |
| 82 | tape_free(tape); | |
| 83 | return 0; //program finished perfectly ok. We return 0. | |
| d7639a | 84 | } |
