Trisurf Monte Carlo simulator
Samo Penic
2012-06-07 074a178761daa61a419ef9c2f38f9cd7adc0cdc7
commit | author | age
d7639a 1 #include<stdio.h>
SP 2 #include<math.h>
3 #include "general.h"
4 #include "vertex.h"
a10dd5 5 #include "bond.h"
a2a676 6 #include "triangle.h"
bb77ca 7 #include "cell.h"
7958e9 8 #include "vesicle.h"
a6b1b5 9 #include "io.h"
7958e9 10 #include "initial_distribution.h"
dac2e5 11 #include "frame.h"
aec47d 12 #include "timestep.h"
d7639a 13
SP 14 /** Entrance function to the program
15   * @param argv is a number of parameters used in program call (including the program name
16   * @param argc is a pointer to strings (character arrays) which holds the arguments
17   * @returns returns 0 on success, any other number on fail.
18 */
19
20 int main(int argv, char *argc[]){
21 ts_bool retval;
aec47d 22 ts_uint i;
3131dc 23     ts_vertex_list *vlist=init_vertex_list(5);
b01cc1 24 ts_vertex_list *vlist1;
a10dd5 25 ts_bond_list *blist=init_bond_list();
a2a676 26 ts_triangle_list *tlist=init_triangle_list();
bb77ca 27 ts_cell_list *clist=init_cell_list(3,3,3,0.3);
7958e9 28 ts_vesicle *vesicle;
d7639a 29
a10dd5 30 retval=vtx_add_cneighbour(blist,vlist->vtx[1],vlist->vtx[0]);
d7639a 31 if(retval==TS_FAIL) printf("1. already a member or vertex is null!\n");
a10dd5 32
SP 33 retval=vtx_add_cneighbour(blist,vlist->vtx[0],vlist->vtx[1]);
d7639a 34 if(retval==TS_FAIL) printf("2. already a member or vertex is null!\n");
a10dd5 35
9802f1 36 retval=vtx_remove_neighbour(vlist->vtx[0],vlist->vtx[1]);
SP 37 vtx_add_neighbour(vlist->vtx[0],vlist->vtx[1]);
38
8f6a69 39 vlist->vtx[0]->x=1.0;
SP 40 vlist->vtx[0]->x=1.1;
b01cc1 41 vlist1=vertex_list_copy(vlist);
a10dd5 42 bond_add(blist, vlist->vtx[1],vlist->vtx[0]);
a2a676 43 triangle_add(tlist,vlist->vtx[1],vlist->vtx[2],vlist->vtx[3]);
a10dd5 44
a2a676 45 triangle_add(tlist,vlist->vtx[1],vlist->vtx[2],vlist->vtx[3]);
SP 46
34d3de 47 printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->nvertex);
bb77ca 48 cell_add_vertex(clist->cell[0], vlist->vtx[0]);
34d3de 49 printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->nvertex);
8f6a69 50 printf("Cell idx=1 has vertex[0] has x coordinate=%e\n",clist->cell[0]->vertex[0]->x);
bb77ca 51 cell_list_cell_occupation_clear(clist);
34d3de 52 printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->nvertex);
bb77ca 53 cell_add_vertex(clist->cell[0], vlist->vtx[0]);
SP 54
55
a2a676 56 triangle_list_free(tlist);
a10dd5 57 bond_list_free(blist);
73f967 58 vtx_list_free(vlist);
bb77ca 59 cell_list_free(clist);
7958e9 60
b01cc1 61 vtx_list_free(vlist1);
SP 62 printf("Tests complete.\n");
83b03a 63 vesicle=initial_distribution_dipyramid(17,60,60,60,0.15);
314f2d 64 //parsetape(vesicle,&i);
SP 65
66 //these four must come from parsetype!
83b03a 67 vesicle->dmax=1.67*1.67;
314f2d 68 vesicle->stepsize=0.15;
SP 69 vesicle->clist->max_occupancy=8;
70 vesicle->bending_rigidity=25.0;
71 fprintf(stderr,"xk=%f",vesicle->bending_rigidity);
dac2e5 72
SP 73 centermass(vesicle);
74 cell_occupation(vesicle);
314f2d 75 for(i=0;i<10000;i++){
aec47d 76 single_timestep(vesicle);
314f2d 77 if(i%100==0){
SP 78 write_vertex_xml_file(vesicle,i/100);
79 }
41a035 80 }
a6b1b5 81 write_master_xml_file("test.pvd");
3131dc 82 write_dout_fcompat_file(vesicle,"dout");
7958e9 83 vesicle_free(vesicle);
SP 84
d7639a 85 return 0; //program finished perfectly ok. We return 0.
SP 86