| commit | author | age | ||
| bc14fb | 1 | #!/usr/bin/python3 |
| SP | 2 | |
| 3 | import configobj | |
| bd6993 | 4 | import xml.etree.ElementTree as ET |
| SP | 5 | import base64 |
| 6 | import zlib | |
| 7 | import io | |
| c14bd6 | 8 | import os |
| SP | 9 | from itertools import islice |
| 10 | import mmap | |
| bc14fb | 11 | ''' |
| SP | 12 | This is a trisurf instance manager written in python |
| 13 | ||
| 14 | ||
| 15 | Invoke with: | |
| 16 | tsmgr [-t tape | -r snapshot.vtu] [-s subdirectory] | |
| 17 | ||
| 18 | If tape is specified, the trisurf wilt start from tape with initial distribution, if snapshot is specified the trisurf will be restored from given snapshot file and simulation will continue. | |
| 19 | ||
| 20 | ''' | |
| 21 | ||
| 22 | ||
| 23 | ||
| 24 | class Tape: | |
| 25 | '''Has all the info on the tape''' | |
| 26 | ||
| 27 | def __init__(self): | |
| 28 | return | |
| 29 | ||
| 30 | def readTape(self, tape='tape'): | |
| 31 | try: | |
| 32 | self.config=configobj.ConfigObj(tape) | |
| 33 | except: | |
| 34 | print("Error reading or parsing tape file!\n") | |
| 35 | exit(1) | |
| 36 | ||
| 37 | def setTape(self, string): | |
| bd6993 | 38 | self.config=configobj.ConfigObj(io.StringIO(string)) |
| bc14fb | 39 | return |
| SP | 40 | |
| 41 | def getValue(self,key): | |
| 42 | return self.config[key] | |
| 43 | ||
| c14bd6 | 44 | def __str__(self): |
| SP | 45 | retval="" |
| 46 | for key,val in self.config.iteritems(): | |
| 47 | retval=retval+str(key)+" = "+str(val)+"\n" | |
| 48 | return retval | |
| bc14fb | 49 | |
| c14bd6 | 50 | |
| SP | 51 | |
| 52 | class Directory: | |
| 53 | def __init__(self, maindir=".", simdir=""): | |
| 54 | self.maindir=maindir | |
| 55 | self.simdir=simdir | |
| 56 | return | |
| 57 | ||
| 58 | def fullpath(self): | |
| 59 | return os.path.join(self.maindir,self.simdir) | |
| 60 | ||
| 61 | def exists(self): | |
| 62 | path=self.fullpath() | |
| 63 | if(os.path.exists(path)): | |
| 64 | return 1 | |
| 65 | else: | |
| 66 | return 0 | |
| 67 | ||
| 68 | def make(self): | |
| 69 | try: | |
| 70 | os.makedirs(self.fullpath()) | |
| 71 | except: | |
| 72 | print("Cannot make directory "+self.fullpath()+"\n") | |
| 73 | exit(1) | |
| 74 | return | |
| 75 | ||
| 76 | def makeifnotexist(self): | |
| 77 | if(self.exists()==0): | |
| 78 | self.make() | |
| 79 | return | |
| 80 | ||
| 81 | def remove(self): | |
| 82 | if(self.exists()): | |
| 83 | try: | |
| 84 | os.rmdir(self.fullpath()) | |
| 85 | except: | |
| 86 | print("Cannot remove directory "+self.fullpath()+ "\n") | |
| 87 | exit(1) | |
| 88 | return | |
| 89 | ||
| 90 | def goto(self): | |
| 91 | try: | |
| 92 | os.chdir(self.fullpath()) | |
| 93 | except: | |
| 94 | print("Cannot go to directory "+self.fullpath()+"\n") | |
| 95 | return | |
| 96 | ||
| 97 | ||
| 98 | class Statistics: | |
| 99 | def __init__(self,path,filename="statistics.csv"): | |
| 100 | self.path=path | |
| 101 | self.filename=filename | |
| 102 | self.fullname=os.path.join(path,filename) | |
| 103 | self.read() | |
| 104 | return | |
| 105 | ||
| 106 | def __str__(self): | |
| 107 | return(str(self.fullname)) | |
| 108 | ||
| 109 | def exists(self): | |
| 110 | if(os.path.isfile(self.fullname)): | |
| 111 | return True | |
| 112 | else: | |
| 113 | return False | |
| 114 | ||
| 115 | def mapcount(self): | |
| 116 | f = open(self.fullname, "r+") | |
| 117 | buf = mmap.mmap(f.fileno(), 0) | |
| 118 | lines = 0 | |
| 119 | readline = buf.readline | |
| 120 | while readline(): | |
| 121 | lines += 1 | |
| 122 | return lines | |
| 123 | ||
| 124 | def read(self): | |
| 125 | if(self.exists()): | |
| 126 | nlines=self.mapcount() | |
| 127 | try: | |
| 128 | with open(self.fullname, "r+") as fin: | |
| 129 | i=0; | |
| 130 | for line in fin: | |
| 131 | if(i==1): | |
| 132 | print (line) | |
| 133 | if(i==nlines-1): | |
| 134 | print (line) | |
| 135 | i=i+1 | |
| 136 | except: | |
| 137 | print("Cannot read statistics file in "+self.fullname+"\n") | |
| 138 | exit(1) | |
| 139 | else: | |
| 140 | print("File "+self.fullname+" does not exists.\n") | |
| 141 | exit(1) | |
| bc14fb | 142 | |
| SP | 143 | class Runner: |
| 144 | ''' | |
| 145 | Class Runner consists of a single running or terminated instance of the trisurf | |
| 146 | ''' | |
| c14bd6 | 147 | def __init__(self, subdir='run0', tape='', snapshot=''): |
| SP | 148 | self.subdir=subdir |
| 149 | if(tape!=''): | |
| 150 | self.initFromTape(tape) | |
| 151 | if(snapshot!=''): | |
| 152 | self.initFromSnapshot(snapshot) | |
| 153 | return | |
| 154 | ||
| 155 | ||
| a99f2b | 156 | def initFromTape(self, tape): |
| bc14fb | 157 | self.tape=Tape() |
| SP | 158 | self.tape.readTape(tape) |
| 159 | ||
| bd6993 | 160 | def initFromSnapshot(self, snapshotfile): |
| SP | 161 | try: |
| 162 | tree = ET.parse(snapshotfile) | |
| 163 | except: | |
| 164 | print("Error reading snapshot file") | |
| 165 | exit(1) | |
| 166 | ||
| 167 | root = tree.getroot() | |
| 168 | tapetxt=root.find('tape') | |
| 169 | version=root.find('trisurfversion') | |
| 170 | self.tape=Tape() | |
| 171 | self.tape.setTape(tapetxt.text) | |
| bc14fb | 172 | |
| SP | 173 | def getStatus(self): |
| c14bd6 | 174 | return 0 |
| bc14fb | 175 | |
| SP | 176 | def start(self): |
| c14bd6 | 177 | if(self.getStatus()==0): |
| SP | 178 | self.Dir=Directory(maindir=self.maindir,simdir=self.subdir) |
| 179 | self.Dir.makeifnotexist() | |
| 180 | self.Dir.goto() | |
| 181 | print("Starting trisurf-ng executable at "+self.Dir.fullpath()+"\n") | |
| 182 | else: | |
| 183 | print("Process already running. Not starting\n") | |
| 184 | return | |
| bc14fb | 185 | |
| SP | 186 | def stop(self): |
| 187 | pass | |
| 188 | ||
| c14bd6 | 189 | def setMaindir(self,prefix,variables): |
| SP | 190 | maindir="./" |
| 191 | for p,v in zip(prefix,variables): | |
| 192 | if(v=="xk0"): | |
| 193 | tv=str(round(float(self.tape.config[v]))) | |
| 194 | else: | |
| 195 | tv=self.tape.config[v] | |
| 196 | maindir=maindir+p+tv | |
| 197 | self.maindir=maindir | |
| 198 | return | |
| 199 | ||
| 200 | def setSubdir(self, subdir="run0"): | |
| 201 | self.subdir=subdir | |
| 202 | return | |
| 203 | ||
| 204 | def getStatistics(self, statfile="statistics.csv"): | |
| 205 | self.statistics=Statistics("", statfile) # we are already in the running directory, so local path is needed! | |
| 206 | return | |
| 207 | ||
| bc14fb | 208 | def __str__(self): |
| c14bd6 | 209 | if(self.getStatus()==0): |
| SP | 210 | str=" not running." |
| 211 | else: | |
| 212 | str=" running." | |
| 213 | return(self.Dir.fullpath()+str) | |
| 214 | ||
| bc14fb | 215 | |
